Pairwise Alignments

Query, 648 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  104 bits (259), Expect = 9e-27
 Identities = 95/318 (29%), Positives = 142/318 (44%), Gaps = 64/318 (20%)

Query: 362 IMNQDLEQQVANRT-QDLALSLT----RLQETQTQLIESEKLAALGGLVAGVAHEVNTPL 416
           + N   E++ A R  QD   SL     RL +T  QL+ +EKLAA+G L AGVAHE+NTPL
Sbjct: 124 MFNDISERERAERALQDTLTSLEQTNRRLTQTHDQLLHAEKLAAIGQLAAGVAHEINTPL 183

Query: 417 GIAVTATSVIQETRESLLN--------AFNQQTLTSQQFAELMERMTQSTLMLET--NLN 466
           G   +    +    E LL         A  QQ    ++      R     ++ ET   ++
Sbjct: 184 GYIQSNLGAMARHLEDLLTLVDAYESAAAGQQPPGRERIDLDFLRQDAPQVLAETRQGIS 243

Query: 467 RAARLVRDFKQ--------------------TAVDQVSESRSQFHVKQVLDALMASLHSE 506
           R + +VR   +                    TA ++  + R  F ++Q  DAL       
Sbjct: 244 RVSTVVRHLLEFSSTCASGEWRQADLEAICRTAAERACQKRHNFRLEQRYDAL------- 296

Query: 507 TRKIPVTPQLHGEDSVMMNSLPGVLTQIMTNLVMNSVNHAFAETAQPEIDIHFYQKD-QQ 565
                  P LH         LP  L Q + NL+ N++    A  A+  + +H    D +Q
Sbjct: 297 -------PPLH--------CLPERLQQALENLIDNAL---LAIPAEGMVRLHGSCPDGRQ 338

Query: 566 IMIEYRDNGCGVAKELHQKIFEPFFTTKRGQGGSGLGLNLVFNLVKQKLH-GQLAFSSEP 624
           I +   DNGCG+A +  + IF PFFTT+    G G+GL++   +   +LH G +   S P
Sbjct: 339 ICLTVEDNGCGIAPQHLESIFNPFFTTRPVGSGEGMGLSVADTVA--RLHGGNIEVESSP 396

Query: 625 GHGVHYVITLPQALSMPQ 642
           G G  + + LP   ++PQ
Sbjct: 397 GLGSRFTLHLPLQNNLPQ 414