Pairwise Alignments

Query, 648 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  228 bits (582), Expect = 3e-64
 Identities = 127/294 (43%), Positives = 177/294 (60%), Gaps = 2/294 (0%)

Query: 345 GTAINITSLKLAQLSLEIMNQDLEQQVANRTQDLALSLTRLQETQTQLIESEKLAALGGL 404
           G A++   +   Q  L+ +N DLE QV  RTQ+L  +L+ L+ TQ  LIE+EK+AALG L
Sbjct: 159 GRAMSAKEILDYQQQLKAINADLEAQVELRTQELETALSDLRSTQHHLIENEKMAALGSL 218

Query: 405 VAGVAHEVNTPLGIAVTATSVIQETRESLLNAFNQQTLTSQQFAELMERMTQSTLMLETN 464
           VAGVAHEVNTPLGIAVT+ +   +    L  AF Q  L   +F   +  M     ++E N
Sbjct: 219 VAGVAHEVNTPLGIAVTSVTHCLDEVALLKAAFEQNELDEDKFLTFINTMQDGLGLIERN 278

Query: 465 LNRAARLVRDFKQTAVDQVSESRSQFHVKQVLDALMASLHSETRKIPVTPQLHGEDSVMM 524
           L RAA LV +FK+TA DQ    R +F++K  L  + +SL    RK  +   +  ++ + +
Sbjct: 279 LTRAAELVHNFKRTAADQSVLERERFNLKAYLFQIFSSLRPLMRKKNIALTVELDEQIFI 338

Query: 525 NSLPGVLTQIMTNLVMNSVNHAFAE--TAQPEIDIHFYQKDQQIMIEYRDNGCGVAKELH 582
            S PG + QI TNLV NS  H F E  T   +I I   ++   I ++Y+DNG G+  E+ 
Sbjct: 339 ESYPGAIAQIFTNLVANSFRHGFPEHFTGDKKITIRVEKQGSNICMQYQDNGVGMTDEVK 398

Query: 583 QKIFEPFFTTKRGQGGSGLGLNLVFNLVKQKLHGQLAFSSEPGHGVHYVITLPQ 636
            K FEPFFTT R  GG+GLG+++++NLV QKLHG +  +S+P  GV   I LP+
Sbjct: 399 IKAFEPFFTTARKDGGTGLGMSIIYNLVTQKLHGSILLTSQPNQGVTIDIQLPE 452