Pairwise Alignments

Query, 648 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  108 bits (269), Expect = 6e-28
 Identities = 85/288 (29%), Positives = 135/288 (46%), Gaps = 25/288 (8%)

Query: 367 LEQQVANRTQDLALSLTRLQETQTQLIESEKLAALGGLVAGVAHEVNTPLGIAVTATSVI 426
           L +Q+      L+L   +L+  Q QL++SEK+ A+G L AGVAHE+N P+G   +    +
Sbjct: 140 LSEQLEQEHTALSLLNKKLEAAQNQLLQSEKMVAIGQLAAGVAHEINNPIGFVNSNLQSL 199

Query: 427 QETRESLLNAFN------------------QQTLTSQQFAELMERMTQSTLMLETNLNRA 468
           Q+    LL   N                  Q  L   QF  +   +          L+R 
Sbjct: 200 QDYNNKLLKLLNFYQKLTHKIGSVPYFTLEQDMLKRYQFEFICSDLPDLIRESIEGLDRV 259

Query: 469 ARLVRDFKQTAVDQVSESRSQF-HVKQVLDALMASLHSETRKIPVTPQLHGEDSVMMNSL 527
           A +V+  K  +   V  S  Q+ +V + ++  +    ++ +   V  +   ++   +   
Sbjct: 260 AVIVKSLK--SFSHVDSSEWQYANVIEGIENTLKIAANQIKYKAVVLRNFQDNLPELYCQ 317

Query: 528 PGVLTQIMTNLVMNSVNHAFAETAQPEIDIHFYQKDQQIMIEYRDNGCGVAKELHQKIFE 587
           P  L Q+  NL+   VN A A   + EI I     D + +I  RD G G+A    +KIFE
Sbjct: 318 PMQLNQVFLNLL---VNAAQAIEERGEISIDVSASDAEFIIVIRDTGSGIAASDLRKIFE 374

Query: 588 PFFTTKRGQGGSGLGLNLVFNLVKQKLHGQLAFSSEPGHGVHYVITLP 635
           PF+TTK    G+GLGL+L +++V QK  G++  SS  G G  + + LP
Sbjct: 375 PFYTTKLVGTGTGLGLSLSYSIV-QKHKGEIKVSSVLGEGTAFTVILP 421