Pairwise Alignments

Query, 648 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., GAF sensor signal transduction histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  231 bits (588), Expect = 7e-65
 Identities = 125/294 (42%), Positives = 177/294 (60%), Gaps = 2/294 (0%)

Query: 345 GTAINITSLKLAQLSLEIMNQDLEQQVANRTQDLALSLTRLQETQTQLIESEKLAALGGL 404
           G A++   +   Q  L+ +N DLE QV  RTQ+L  +L+ L+  Q  L+E+EK+AALG L
Sbjct: 159 GRAMSAKEILDYQHQLKAINADLEVQVEQRTQELETALSDLRSIQHHLVENEKMAALGSL 218

Query: 405 VAGVAHEVNTPLGIAVTATSVIQETRESLLNAFNQQTLTSQQFAELMERMTQSTLMLETN 464
           VAGVAHEVNTPLGIAVT+ +   +    L  AF Q  L   +F   +  M     ++E N
Sbjct: 219 VAGVAHEVNTPLGIAVTSVTHCLDEVALLKTAFEQNELDEDKFLSFINTMQDGLGLIERN 278

Query: 465 LNRAARLVRDFKQTAVDQVSESRSQFHVKQVLDALMASLHSETRKIPVTPQLHGEDSVMM 524
           L+RAA LV +FK+TA DQ    R +F++K  +  + +SL    RK  +   +  +D + +
Sbjct: 279 LSRAAELVHNFKRTAADQSVLERERFNLKTYIFQIFSSLRPLMRKKNIVLNVELDDDIFI 338

Query: 525 NSLPGVLTQIMTNLVMNSVNHAFAE--TAQPEIDIHFYQKDQQIMIEYRDNGCGVAKELH 582
            S PG + QI TNLV NS  H F E  T    I I   ++D  I ++Y+DNG G++ E+ 
Sbjct: 339 ESYPGAIAQIFTNLVANSFRHGFPESFTGDKSITIRVQKQDSNICMQYQDNGVGMSDEVK 398

Query: 583 QKIFEPFFTTKRGQGGSGLGLNLVFNLVKQKLHGQLAFSSEPGHGVHYVITLPQ 636
            K FEPFFTT R  GG+GLG+++++NLV QKLHG +  +S P  GV   I +P+
Sbjct: 399 LKAFEPFFTTARKDGGTGLGMSIIYNLVTQKLHGTILLASSPDQGVKVEIQIPE 452