Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., Response regulator from Pseudomonas fluorescens FW300-N1B4

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 14/182 (7%)

Query: 328 TSKELVYNLANAVEARSRETGAHV-QRVALYCERLAHLYGLAESEADMIKNASPLHDVGK 386
           T  E+   LAN     +++T   + + V +YC+    L+GL E  +  +  A+ L+++GK
Sbjct: 190 TGTEVFSLLANLRLPPAKQTNRQIIELVRVYCK----LHGLDEGSSRDLTMAAALYNIGK 245

Query: 387 VAIPDSILHKPGKL----DAQEWAIMQKHVEYGVEILNRSKRRLMQVAKEIAATHHEKWD 442
           ++  DS++  P  L    D + +    K  E  +  L+      M+ A  +   H E+WD
Sbjct: 246 LSWTDSMMSTPSDLLHHNDRERYRGYPKQSESLLMTLDP-----MKDAARLILHHQERWD 300

Query: 443 GSGYPNRLQGDDIPISGRITAIADVFDALGAKRSYKDPWTDEQIREELMAQKGRHFEPKL 502
           GSG+P+RL+G+ IP   R+  +A  F  L      +     ++    +    GR ++P+L
Sbjct: 301 GSGFPDRLKGEAIPFGSRLLKLAVDFIELQRGLILERQMNSDEALVYIRQYAGRLYDPEL 360

Query: 503 VE 504
           VE
Sbjct: 361 VE 362



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 23/175 (13%)

Query: 37  VLLVDDDEQMHQITRLALTGFKFQNRPLELISVLSGLEARKVMAERSDIALALVDVVMET 96
           +LLVDD+E +    R  L G     +P E++   SG +A ++MA++  I L + D  M  
Sbjct: 15  LLLVDDEESILNSLRRLLRG-----QPYEVLLATSGAQALEIMAQQ-PIDLVMSDARMPN 68

Query: 97  EHAGLDLVRYIREELQNRQVRLVLRTGQAGQAPEDRVIKEYEIDDYKEKTELTTQKLRTL 156
              G  L+ ++ +   +  +R++L TG A  +   + I   +I  Y  K     + L TL
Sbjct: 69  MD-GATLLAHVHQRYPD-TLRIML-TGYADPSVIIKAINGGQIHRYISKPWHDEEMLLTL 125

Query: 157 LYSMLRAYRD---LCLIED-----QKLGL------SHVIEASANVQNTKSLQSYA 197
             S+   + +   L L+++     +KL L       HV   ++ +Q T  +   A
Sbjct: 126 RQSLAYQHSERERLRLVQETWDQNEKLKLLNATLEKHVAARTSELQQTADMLDLA 180