Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  168 bits (426), Expect = 6e-46
 Identities = 108/319 (33%), Positives = 171/319 (53%), Gaps = 11/319 (3%)

Query: 34  PWCVLLVDDDEQMHQITRLALTGFKFQNRPLELISVLSGLEARKVMAERSDIALALVDVV 93
           PW + ++DD+  +H +TRLAL   +   RPLE +S  S  E   ++ +  ++AL L+DVV
Sbjct: 44  PWIIGIIDDEPAIHDVTRLALKHVRVFGRPLEFVSAFSAKEGFDLVKKHPEMALVLLDVV 103

Query: 94  METEHAGLDLVRYIREELQNRQVRLVLRTGQAGQAPEDRVIKEYEIDDYKEKTELTTQKL 153
           MET+ AGL LV  IR EL N  +++VLRTGQ G  PE+ VI +YEI+ YK K+ELT  KL
Sbjct: 104 METDEAGLMLVDRIRNELDNHLLQIVLRTGQPGYTPEEEVILKYEINSYKTKSELTRNKL 163

Query: 154 RTLLYSMLRAYRDLCLIEDQKLGLSHVIEASANVQNTKSLQSYATAVLNQLTSLLKLHAS 213
            T++ + LR +  +  +E  + GL  VI A+AN+   +SL  +A  VL Q+ +L  + A 
Sbjct: 164 FTVVATGLRCFSQMDALERSRQGLRSVINAAANLFQERSLHEFAGGVLEQIDALFNIKAD 223

Query: 214 AFYCVATP------CPDSEKCNALTVATTAERVELYVESPFKGLPEDVQRR-CKEVLSQR 266
           + +CV+          DS       VA + +    Y +S  +  PE  QR+  +E L+  
Sbjct: 224 SLFCVSKRPMNGPFAIDSGNHEFFVVAASDKFRPFYGKSLDELSPELEQRKLVQETLNAH 283

Query: 267 TTRDYGDAYVFFKQDERGVDSVLYVGFEQELSELDRKLLEIYMYNIGLTFENINLMVDLR 326
               + +    +     G   V+       L+++D++LL+++  N+ L  EN      L 
Sbjct: 284 QHVFHPNCSCLYLSTPSGWQGVIVAENATGLTKVDQELLQVFCLNVALGLENAKFFAHLN 343

Query: 327 ETS--KEL--VYNLANAVE 341
           + +   EL  ++N A  VE
Sbjct: 344 KAAFFDELTGLHNRAGLVE 362