Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Response regulator receiver (CheY) and unknown domain protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  198 bits (503), Expect = 3e-55
 Identities = 113/310 (36%), Positives = 175/310 (56%), Gaps = 4/310 (1%)

Query: 34  PWCVLLVDDDEQMHQITRLALTGFKFQNRPLELISVLSGLEARKVMAERSDIALALVDVV 93
           PW +L+VDDD ++H ++RL L+  +F+ R + + S  S  EAR ++    D+A+ L+DVV
Sbjct: 25  PWVILVVDDDTEVHALSRLLLSEIEFKGRRVAMYSAYSAAEARAMLGRIDDVAVILLDVV 84

Query: 94  METEHAGLDLVRYIREELQNRQVRLVLRTGQAGQAPEDRVIKEYEIDDYKEKTELTTQKL 153
           MET+ AGL LVR IRE + NR VR++LRTGQ GQAPE  VI+ Y+I+DYK KTELT QKL
Sbjct: 85  METDDAGLKLVRTIRETMNNRDVRIILRTGQPGQAPEREVIETYDINDYKSKTELTAQKL 144

Query: 154 RTLLYSMLRAYRDLCLIEDQKLGLSHVIEASANVQNTKSLQSYATAVLNQLTSLLKLHAS 213
            T L + LRAY D+  +   + GL  +++A+A++   +S++ +A  VL Q+ +LL     
Sbjct: 145 HTALVAALRAYDDIMALVLSRQGLRKILDAAASLYRQRSMELFAAGVLTQINALLGGDRD 204

Query: 214 AFYCVAT---PCPDSEKCNALTVATTAERVELYVESPFKGLPED-VQRRCKEVLSQRTTR 269
              CV +      + +   A+ V   +   E  V      LPE  V    +E  + RT+R
Sbjct: 205 GILCVQSRKEQADEDDPAGAMVVLAASGAYERLVGKRVDELPESPVISLIREAAASRTSR 264

Query: 270 DYGDAYVFFKQDERGVDSVLYVGFEQELSELDRKLLEIYMYNIGLTFENINLMVDLRETS 329
               A   +     G ++V+++   + L   DR L++++  NI   F+ +  + DLR  +
Sbjct: 265 HGSHASALYMPTGDGRETVVFLHAAEPLKAQDRALMQLFCDNISAGFDTVCEIDDLRREN 324

Query: 330 KELVYNLANA 339
             L   L  A
Sbjct: 325 VRLRARLGEA 334