Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., HD domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 5e-29
 Identities = 52/123 (42%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 381 LHDVGKVAIPDSILHKPGKLDAQEWAIMQKHVEYGVEILNRSKRRLMQVAKEIAATHHEK 440
           LHD+GK+ + + +LHKPGKL  +E+  M+ H  Y +EI++ +K  L Q++K++   HHEK
Sbjct: 191 LHDIGKIKVDNKVLHKPGKLTPEEFEHMKLHQVYALEIMSETKG-LSQISKDVCLMHHEK 249

Query: 441 WDGSGYPNRLQGDDIPISGRITAIADVFDALGAKRSYKDPWTDEQIREELMAQKGRHFEP 500
            DG GYP  L+GD+IP+ GR++ I D+FDAL A R YK+  +     + L++    H + 
Sbjct: 250 LDGRGYPRGLKGDEIPLHGRMSCIVDIFDALTATRCYKEAMSPAAAFKILLSLTPFHLDQ 309

Query: 501 KLV 503
           +LV
Sbjct: 310 QLV 312