Pairwise Alignments

Query, 522 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., HDIG domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (266), Expect = 1e-27
 Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 5/186 (2%)

Query: 330 KELVYNLANAVEARSRETGAHVQRVALYCERLAHLYGLAESEADMIKNASPLHDVGKVAI 389
           K+L   LA  V+A+S  T  H ++VAL  + +A   G+++++A+++  A  LHDVGK+  
Sbjct: 230 KQLARFLARIVDAKSPFTFHHSEKVALLAKLVAKDCGISDTDAELLYVAGLLHDVGKLKT 289

Query: 390 PDSILHKPGKLDAQEWAIMQKHVEYGVEILNRSKRRLMQVAKEIAATHHEKWDGSGYPNR 449
           PD +LHK GKL  +E++I+++H       L+R   +   V  E A+ HHE+ DGSGYP  
Sbjct: 290 PDLLLHKEGKLTKEEYSIVKRHTVDTEHTLHRFFPK--SVIGEWASNHHERLDGSGYPFS 347

Query: 450 LQGDDIPISGRITAIADVFDALGAKRSYKDPWTDEQIRE--ELMAQKGRHFEPKLVELLL 507
            + + + +  RI A+ DVF AL  KR Y+   +  +I +  + M  KG+  +  +  +LL
Sbjct: 348 KRQEQLDLPSRILAVVDVFQALTQKRPYRGSLSLSEIYDIMQPMVDKGQ-LDAGVYSILL 406

Query: 508 EHWDEF 513
              D F
Sbjct: 407 ADIDNF 412