Pairwise Alignments

Query, 442 a.a., anaerobic C4-dicarboxylate transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., anaerobic C4-dicarboxylate membrane transporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  450 bits (1158), Expect = e-131
 Identities = 223/447 (49%), Positives = 317/447 (70%), Gaps = 6/447 (1%)

Query: 1   MLYVEFLFLLLMLYIGSRYGGIGLGVVSGIGLVIEVFVFKMPPTSPPITVMLIILAVVTC 60
           M+ +EF+ +L  L +G+RYGG+GLG++SGIGL +  FVF + P  PP+ VML ILAV+ C
Sbjct: 1   MILMEFIVVLGCLLLGTRYGGMGLGLISGIGLFLLTFVFGLAPGQPPVQVMLTILAVIGC 60

Query: 61  ASILEAAGGLKYMLQVAERMLRKNPKRVTLIAPFVTYTMTFMLGTGHAVYSIMPIIGDVA 120
           A++L+ AGGL  M+Q AER+LR++P+ +T++AP  T+T+TF+ GTGH VY++ PII D+A
Sbjct: 61  AAVLQTAGGLDVMMQFAERLLRRHPQYITILAPLTTWTLTFLCGTGHVVYTMFPIISDIA 120

Query: 121 LKNGIRPERPMAAASVASQIAITASPISAAVVYYLAELA---NINHNITLLSILMVTIPA 177
           LK  IRPERPMA ASVASQ+AI ASP+S AVV  ++ LA    + H  ++L ILMV++PA
Sbjct: 121 LKKNIRPERPMAVASVASQMAICASPVSVAVVSMVSILAAQQGVGHAYSMLEILMVSVPA 180

Query: 178 TLFGTLLMSLYSLRRGKELDNDPEYQARLQDPVWREKILNTTATSLDETLPASARNSVLL 237
           +L G L+ +L+SLRRGK+LD D E+Q R+QDPV R  I +   T L++T P  A  +  +
Sbjct: 181 SLCGVLVAALWSLRRGKDLDKDEEFQERIQDPVQRAFIYDKGETLLNQTFPKQAYWATGI 240

Query: 238 FISSILVIVVIAMWPEIRTIQEGT---KPIGMDMVIQMIMLCFGGIILLATKTDPRSVPN 294
           F ++I  +V++  + E+R + E      P+ M++VIQM+ML  G  IL++ K  P  + N
Sbjct: 241 FFAAIAAVVLLGSFSELRPVFEEKGKLAPLSMNLVIQMMMLIAGAFILMSCKVKPAEIAN 300

Query: 295 GVVFKSGMVAAIAIFGIAWMSDTYFQYAMPQFKSGIVEMVTNYPWTFALALFIVSVVVNS 354
           G VFK+GMVA  ++FG+AWMSDT+F   M   K  +  +V N PWT+AL LF++S +VNS
Sbjct: 301 GPVFKAGMVAIFSVFGVAWMSDTFFISHMDVLKENLSHVVQNQPWTYALVLFLISKLVNS 360

Query: 355 QAAVARMMLPVGLGLGLEPALLIGLMPALYGYFFIPNYPSDIATVNFDNTGTTKIGKWYF 414
           QAA    + P+GL LG++P LLI  +PA YGYF +P YPSD+A + FD +GTTKIGK+  
Sbjct: 361 QAAALTAIAPMGLALGVDPKLLIAFLPASYGYFVLPTYPSDLACIGFDRSGTTKIGKFII 420

Query: 415 NHSFMAVGLISVISACCVGFVLSKIII 441
           NHSF+  GLI V +A  VG++L+  ++
Sbjct: 421 NHSFIIPGLIGVGTASTVGYLLATALL 447