Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., ATP-dependent RNA helicase DeaD (RefSeq) from Shewanella amazonensis SB2B

 Score =  286 bits (733), Expect = 1e-81
 Identities = 153/384 (39%), Positives = 236/384 (61%), Gaps = 5/384 (1%)

Query: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
           F  LGL+  +L+A++E GY TP+PIQ  +I  +++G+D++  AQTGTGKT  F LP+L  
Sbjct: 8   FRELGLTESVLRALDELGYETPTPIQAASIQPLMSGQDILGQAQTGTGKTGAFALPLLCS 67

Query: 63  LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMC 121
           +        N  + L+L PTRELA Q+ +    Y +H+       ++GG  +  Q+Q + 
Sbjct: 68  V----DANLNAPQILVLAPTRELAVQVAEAFTSYAKHMKGFHVLPIYGGQSMYQQLQALR 123

Query: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQN 181
           +G  ++V TPGR+MD   +  +K D L+ LVLDEAD ML MGFI DI  IL+  PE RQ 
Sbjct: 124 RGPQVVVGTPGRVMDHMRRGTLKLDTLKALVLDEADEMLKMGFIDDIEWILEHTPESRQL 183

Query: 182 LLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKEG 241
            LFSAT   +I+ +A   + NPV IS++ +++T  ++EQ         K + LV++++  
Sbjct: 184 ALFSATMPEQIKRVANKHLRNPVNISIAASHTTVESIEQRFVQVSQHNKLEALVRVLEVE 243

Query: 242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATD 301
           N + +++F+RT++    LA  L  +G  A+ +HG+ +Q AR RA+   K+G++ IL+ATD
Sbjct: 244 NTEGIIIFVRTRNSCMELAEKLEARGYAASPLHGDMNQQARERAVDQLKSGKLDILIATD 303

Query: 302 IAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIERL 361
           +AARG+D+ ++  VVN+++P   E YVHRIGRTGRAG  G AI  V++ E   L  IER 
Sbjct: 304 VAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERA 363

Query: 362 TQALLPRVNLAGFEPTNQLPESKL 385
           T + +  + +   E   +   S+L
Sbjct: 364 TNSRISPMKIPSPESVAERRLSRL 387