Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  291 bits (744), Expect = 6e-83
 Identities = 157/379 (41%), Positives = 235/379 (62%), Gaps = 10/379 (2%)

Query: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
           F  LGLS PIL+A+ + GY TPS IQ + IP ++ GKD++  AQTGTGKTA F LP+L+ 
Sbjct: 8   FAQLGLSEPILQALTDVGYETPSSIQAECIPLLMEGKDLLGMAQTGTGKTAAFALPLLQK 67

Query: 63  LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMC 121
           L     V     +AL+L PTRELA Q+ +    Y +HLP      ++GG  +  Q++++ 
Sbjct: 68  L----DVTQRFPQALVLAPTRELAIQVAEACQKYAKHLPGFHVLPIYGGQSLGIQLKQLQ 123

Query: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQN 181
           +GA +++ TPGR+MD   + ++   +L+ LVLDEAD ML MGFI D+  IL+ +P +RQ 
Sbjct: 124 RGAHVIIGTPGRVMDHLERKSLDLSRLKTLVLDEADEMLRMGFIDDVEWILEHIPAERQT 183

Query: 182 LLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVK-E 240
            LFSAT   +IR +A+  + +P E+ +  A ST   ++Q  +      K D L ++++ E
Sbjct: 184 ALFSATMPEQIRRVAQKYLRDPQEVKIKSATSTVSAIQQRYWQVSGLHKLDALTRIMEVE 243

Query: 241 GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVAT 300
            +    ++F+RTK     LA  L  +G  AAA++G+ +Q +R R +   K+G + I++AT
Sbjct: 244 DSLDAAIIFVRTKTATEELAQKLEARGYAAAALNGDMNQASRERVIEQLKSGGLDIVIAT 303

Query: 301 DIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIER 360
           D+AARGID+P++  V+N+++P   E YVHRIGRTGRAG  G AI  VS  E   L  IE+
Sbjct: 304 DVAARGIDVPRVSHVINYDIPYDVEAYVHRIGRTGRAGRTGTAILFVSPREMRMLRTIEK 363

Query: 361 LTQALLPRVNLAGFEPTNQ 379
           +T+  +  + L    PT Q
Sbjct: 364 VTRQNISPLRL----PTKQ 378