Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., DEAD/DEAH box helicase domain protein from Marinobacter adhaerens HP15

 Score =  535 bits (1378), Expect = e-156
 Identities = 282/444 (63%), Positives = 337/444 (75%), Gaps = 14/444 (3%)

Query: 1   MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60
           M F+SLGLS  +++A  ++GY TPSPIQ QAIPAVL+G+DVMAAAQTGTGKTAGFTLP+L
Sbjct: 1   MSFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL 60

Query: 61  ELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRM 120
           + L + P+      RALILTPTRELAAQ+ D+V LY +++P K+AVVFGGVKINPQM ++
Sbjct: 61  QRLGENPRTGKGP-RALILTPTRELAAQVHDSVNLYSKYIPTKAAVVFGGVKINPQMMKL 119

Query: 121 CKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQ 180
            KG D+LVATPGRLMDLY QNAV+F+++EILVLDEADRMLDMGFIRDI KIL LLP KRQ
Sbjct: 120 RKGLDVLVATPGRLMDLYQQNAVRFNEVEILVLDEADRMLDMGFIRDIRKILSLLPAKRQ 179

Query: 181 NLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKE 240
           NLLFSATFS EIR LA+GL++NPV++ V+  N++A  ++Q +YP D  +K  +L KLV++
Sbjct: 180 NLLFSATFSNEIRTLAEGLLDNPVQVEVAARNTSAENIKQSVYPVDQSQKTALLSKLVRD 239

Query: 241 GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVAT 300
            +W QVLVF RTKHGANRL   L + G+TAAAIHGNKSQGARTRALADFKAGEVR+LVAT
Sbjct: 240 NSWDQVLVFTRTKHGANRLTQKLEKDGITAAAIHGNKSQGARTRALADFKAGEVRVLVAT 299

Query: 301 DIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIER 360
           DIAARG+DI QLPQVVNFELP + EDYVHRIGRTGRAGE G A+SLVSA E   L  IER
Sbjct: 300 DIAARGLDIKQLPQVVNFELPNVPEDYVHRIGRTGRAGESGHALSLVSADEGKMLAGIER 359

Query: 361 LTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKKVEGAGENKGSVAE--NKPKA 418
           L +  LPR  + GFEPTN L        PLKPK    P +      N G       KPK+
Sbjct: 360 LIKKQLPRTEVEGFEPTNNL--------PLKPKAKADPSRARNRNGNGGGNGRPGGKPKS 411

Query: 419 GHRGQPTGQA--RTAKKGGTHSEP 440
               +P G++  R+   GG  S P
Sbjct: 412 -FGAKPGGRSGGRSQNGGGQRSRP 434