Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Klebsiella michiganensis M5al

 Score =  279 bits (714), Expect = 2e-79
 Identities = 150/374 (40%), Positives = 230/374 (61%), Gaps = 5/374 (1%)

Query: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
           F  LGL APIL+A+ + GY  PSPIQ + IP +L G+DV+  AQTG+GKTA F+LP+L  
Sbjct: 8   FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNN 67

Query: 63  LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAV-VFGGVKINPQMQRMC 121
           L   P++RA Q+  L+L PTRELA Q+ + +  + +H+   + V ++GG + + Q++ + 
Sbjct: 68  L--DPELRAPQI--LVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR 123

Query: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQN 181
           +G  I+V TPGRL+D   +  +   +L  LVLDEAD ML MGFI D+  I+  +PE  Q 
Sbjct: 124 QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQT 183

Query: 182 LLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKEG 241
            LFSAT    IR + +  +  P E+ +  + +T   + Q  + A   +K + LV+ ++  
Sbjct: 184 ALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFLEAE 243

Query: 242 NWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATD 301
           ++   ++F+RTK+    +A  L   G ++AA++G+ +Q  R + L   K G + IL+ATD
Sbjct: 244 DFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILIATD 303

Query: 302 IAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIERL 361
           +AARG+D+ ++  VVN+++P  +E YVHRIGRTGRAG  G+A+  V   E   L  IER 
Sbjct: 304 VAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERT 363

Query: 362 TQALLPRVNLAGFE 375
            +  +P V L   E
Sbjct: 364 MKLTIPEVELPNAE 377