Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., ATP-dependent RNA helicase RhlE from Klebsiella michiganensis M5al

 Score =  470 bits (1209), Expect = e-137
 Identities = 254/453 (56%), Positives = 325/453 (71%), Gaps = 16/453 (3%)

Query: 1   MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60
           M F SLGL+  IL+A+ E+GY  P+PIQ QAIPAVL G+D+MA+AQTGTGKTAGFTLP+L
Sbjct: 1   MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  E-LLAKGPKVRANQ-VRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118
           + L+ K P  +  + VRALILTPTRELAAQI +NV  Y ++L ++S VVFGGV INPQM 
Sbjct: 61  QHLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM 120

Query: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178
           ++  G DILVATPGRL+DL +QNAV  D++E+LVLDEADRMLDMGFI DI ++L  LP K
Sbjct: 121 KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAK 180

Query: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLV 238
           RQNLLFSATFS EI+ LA+ L++NP+EI V+  N+ +  V Q ++  D K+K ++L +++
Sbjct: 181 RQNLLFSATFSDEIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLSQMI 240

Query: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298
            EGNWQQVLVF RTKHGAN LA  LN+ G+ +AAIHGNKSQGARTRALADFK+G +R+LV
Sbjct: 241 GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV 300

Query: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAI 358
           ATDIAARG+DI +LP VVN+ELP + EDYVHRIGRTGRA   G+A+SLV   E   L  I
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI 360

Query: 359 ERLTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKKVEGAGENKGSVAENKPKA 418
           ERL +  +PR+ LAG+EP             +K +  +  ++ +  G  +G  ++ +   
Sbjct: 361 ERLLKKEIPRIALAGYEPDPS----------IKAEPIQNGRQQQRGGGGRGGQSQGRGGQ 410

Query: 419 GH-RGQPTGQART---AKKGGTHSEPKKPTKRP 447
           G  RGQ +   RT   A K  T        +RP
Sbjct: 411 GQGRGQQSAPRRTDGEAPKARTQDGKPPRRRRP 443