Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., ATP-dependent RNA helicase RhlE from Enterobacter sp. TBS_079

 Score =  464 bits (1194), Expect = e-135
 Identities = 249/454 (54%), Positives = 323/454 (71%), Gaps = 17/454 (3%)

Query: 1   MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPIL 60
           M F SLGL+  IL+AI E+GY  P+PIQ QAIPAVL G+D+MA+AQTGTGKTAGFTLP+L
Sbjct: 1   MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL 60

Query: 61  ELLAKG-PKVRANQ-VRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQ 118
           ELL K  P  +  + VRALILTPTRELAAQI +NV  Y R+L ++S VVFGGV INPQM 
Sbjct: 61  ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM 120

Query: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178
           ++  G D+LVATPGRL+DL +QNA+K D +EILVLDEADRMLDMGFI DI ++L  LP +
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNALKLDSIEILVLDEADRMLDMGFIHDIRRVLAKLPPR 180

Query: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLV 238
           RQNLLFSATFS EI+ LA+ L++NP+E+ V+  N+ +  + Q ++  D K+K ++L  ++
Sbjct: 181 RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQITQHVHFVDKKRKRELLSHMI 240

Query: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298
            +GNWQQVLVF RTKHGAN LA  LN+ G+ +AAIHGNKSQGARTRALA+FK+G++R+LV
Sbjct: 241 GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALAEFKSGDIRVLV 300

Query: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAI 358
           ATDIAARG+DI +LP VVN+ELP + EDYVHRIGRTGRA   G+A+SLV   E   L  I
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360

Query: 359 ERLTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKKVEGAGENKGSVAEN-KPK 417
           ERL +  +PR+   G+           D  P    +P +  +  G G  +G    + +P+
Sbjct: 361 ERLLRKEIPRIETPGY-----------DVDPSIKAEPIQNGRQGGGGRGQGGGGRSQQPR 409

Query: 418 AGHRGQPTGQARTAKKGGTHSEPKKPTKRPVRNG 451
               G P    +  ++   ++E K   + P R+G
Sbjct: 410 RSEGGAPKAAGKPPRR---NTEAKPGGESPWRSG 440