Pairwise Alignments

Query, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., 4a-hydroxytetrahydrobiopterin dehydratase (RefSeq) from Shewanella sp. ANA-3

 Score =  353 bits (906), Expect = e-102
 Identities = 188/410 (45%), Positives = 266/410 (64%), Gaps = 13/410 (3%)

Query: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
           F  LG+ AP+   + E  Y  P+PIQ   IPAVL+G+DV+A A TG+GKTA F +P+L+ 
Sbjct: 11  FAELGIIAPLCNRLSELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLLQR 70

Query: 63  L--AKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHL--PLKSAVVFGGVKINPQMQ 118
           L  AK  +  A QVR L+L PTRELA Q+ D+ + Y  H    LK    FGGV +N QMQ
Sbjct: 71  LFEAKTAEKSAGQVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQ 130

Query: 119 RMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK 178
            +  GAD+LVATPGRL+DL   NA+K +++  LVLDEADRML +GF  +++++L+ LP K
Sbjct: 131 SLRAGADVLVATPGRLLDLLASNALKLNRVSALVLDEADRMLSLGFTDELNQVLEALPSK 190

Query: 179 RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLV 238
           +Q LL+SATF  E+R L   L++ P+E  +     +  T+EQ +   + ++K  +L  L+
Sbjct: 191 KQTLLYSATFPEEVRALTAKLLHQPLEYHLQSEQES--TIEQRVITVNREQKTALLAHLI 248

Query: 239 KEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILV 298
           K+  W Q L+F+  K+  N LA  L+++G++A   HG+K+QGARTR L  FK+GE+ +L+
Sbjct: 249 KQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKSGEISVLI 308

Query: 299 ATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAI 358
           ATDIAARGIDI +LP V+NF+LP+   DY+HRIGR+GRAGE G A++L+S  E      I
Sbjct: 309 ATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYHHFGVI 368

Query: 359 ERLTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKKVEGAGENK 408
           E+  +  L R  + GFE   ++P        L  +KP+   K EG G+ K
Sbjct: 369 EKKNKIKLVREQIPGFEANAEMP-----LEVLAQEKPQ--AKPEGTGKKK 411