Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family from Pseudomonas fluorescens FW300-N2E2

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 26/221 (11%)

Query: 18  ETPMLILSVVYVVVALLPDIAVLSPDDLEFLDGLLWIVWGIFATELLVKIFVSPKPLQYM 77
           ++ +L++ +  +V+ +L  I  +  +    L G+ W    +F  E  ++++ SPKPL+Y 
Sbjct: 27  DSTLLLIILASLVIVMLDSIDSVHKNYAALLAGIEWGFTFVFIVEYGLRLYCSPKPLRYA 86

Query: 78  MQNW---------PDVL---------IVAMPFLRPLRFLRILLVLP--KAWRQTKSVLR- 116
              +         P +L         ++ +  +R LR  R+L + P  K      + LR 
Sbjct: 87  FSFYGLVDLLAIVPGILALYYSDAQYLLIIRIIRMLRIFRVLKLSPYLKQANYLMAALRG 146

Query: 117 QKTFSFIGLTSLSTVLLSAAFVYLVEKGTPSPINSYADALWWAMSTITTVGYGDMYPVTG 176
            K    + L S+ST++     +  V +G      S    ++WA+ T+TTVG+GD+ P T 
Sbjct: 147 SKQKIIVFLVSVSTLVTVFGTLMYVIEGPEHGFTSIPKGIYWAIVTLTTVGFGDIVPKTP 206

Query: 177 FGRGVAVFLMLTGITLF----GLLTASVASFFVEDDTAKQD 213
            G+ V+  +M+TG ++     G+ TA +A+  +  D  K D
Sbjct: 207 LGQVVSSLVMITGYSIIAVPTGIFTAELAT-AMRGDQLKHD 246