Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 87.0 bits (214), Expect = 3e-22
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 26/230 (11%)

Query: 1   MKLTLRKKLLEKVENTTETPMLILSVVYVVVALLPDIAVLSPDDLEFLDGLLWIVWGIFA 60
           +K  L K +L+      +  M+ L++V V +     ++  +P+    L     ++  IF 
Sbjct: 5   LKTALEKSILD------DLLMVALALVDVFLLFFEVLSAHTPEQTYALQVADTVIACIFL 58

Query: 61  TELLVKIFVSPKPLQYMMQNWPDVLIVAMPF-------LRPLRFLRIL-----------L 102
            E  V+ F++   + +  + W + L+ ++P        LR LR +R+            L
Sbjct: 59  IEFFVRFFLAENKVLFFRKYWWE-LLASIPINDFVFQALRGLRIVRLFRLIRLLRFVRFL 117

Query: 103 VLPKAWRQTKSVLRQKTFSFIGLTSLSTVLLSAAF-VYLVEKGTPSPINSYADALWWAMS 161
           V  +   +  +   +KT+     T    V++SAA   Y +E      ++S  DA WW + 
Sbjct: 118 VRFRIILEASARFAEKTYLLYIATLGGVVVMSAALGFYYMEVNVNENVSSLWDAFWWTVV 177

Query: 162 TITTVGYGDMYPVTGFGRGVAVFLMLTGITLFGLLTASVASFFVEDDTAK 211
           TITTVGYGD+YPVT  GR +A+ LML GI  F  +TA++A++ +  +  K
Sbjct: 178 TITTVGYGDIYPVTTAGRILAIALMLGGIGTFSSITAAIAAYTISKNKNK 227