Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., ion channel from Rhodopseudomonas palustris CGA009

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 52/198 (26%), Positives = 103/198 (52%), Gaps = 28/198 (14%)

Query: 23  ILSVVYVV-VALLPDIAVLSPDDLEFLDGLLWIVWGIFATELLVKIFVSPKPLQYM--MQ 79
           ++++V++V  + LP   V+   D  F  G+L ++      + L +++ S  P++    + 
Sbjct: 33  VVTIVFIVGTSFLPPNPVVEALDTGF--GVLIMI------DFLARLYASRGPMREFGRLA 84

Query: 80  NWPDVLIVAMPFLRPLR-----FLRILLVLPKAWRQTKSVLRQKTFS---------FIGL 125
            W D++ +   FL PL      FLRIL  L +A++  + + R ++ S          I +
Sbjct: 85  TWTDLVAIGS-FLAPLPGEGAGFLRILRTL-RAFQDYQMLTRLRSDSAFFRHHEEVVIAV 142

Query: 126 TSLST-VLLSAAFVYLVEKGTPSPINSYADALWWAMSTITTVGYGDMYPVTGFGRGVAVF 184
             L+  + +  A V+  ++ +   I +YADAL++ ++ +TT G+GD+      GR ++V 
Sbjct: 143 ARLAVFIFVMTAIVFETQRFSNPQIANYADALYFTVTALTTTGFGDITLPGTLGRMISVV 202

Query: 185 LMLTGITLFGLLTASVAS 202
           +M+ G+TLF  L  ++ S
Sbjct: 203 IMIFGVTLFFNLARALIS 220