Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., Ion transport protein (RefSeq) from Shewanella loihica PV-4

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 66/239 (27%), Positives = 112/239 (46%), Gaps = 33/239 (13%)

Query: 6   RKKLLEKVENTTETPMLILSVVYVVVALLPDIAVLSPDDLEFLDGLL--------WIVWG 57
           RK+ L ++   T+TP      + ++V ++  +A++  D ++ +            W   G
Sbjct: 9   RKQKLREIIFGTDTPAGRYFDLSLIVCIVLSVALVFVDTIDSVHNRYGDWIRIAEWGFTG 68

Query: 58  IFATELLVKIFVSPKPLQY---------MMQNWPDVLIVAMP------FLRPLRFLRILL 102
           IF  E L++++ S  P+QY         ++   P  L +  P       +R LR  RI  
Sbjct: 69  IFTLEYLLRLYCSAHPVQYARSFYGVVDLLSILPSYLALIFPGANFTLVIRVLRLFRIFR 128

Query: 103 VLP--KAWRQTKSVLR------QKTFSFIGLTSLSTVLLSAAFVYLVEKGTPSPINSYAD 154
           VL   +   +   +LR      +K F F    SL  ++LSA  +Y+VE G      S   
Sbjct: 129 VLKLLRYLSEGNILLRAMMQSSRKVFLFFFSVSLIVMVLSA-IMYVVE-GPEHGFTSMPK 186

Query: 155 ALWWAMSTITTVGYGDMYPVTGFGRGVAVFLMLTGITLFGLLTASVASFFVEDDTAKQD 213
           +++W + TITTVGYGD+ P T  G+G+A   ML G ++  + T  + S   ++   K+D
Sbjct: 187 SIYWTIVTITTVGYGDITPQTTLGQGIAALTMLIGYSIIAIPTGILTSEISQEMVRKKD 245