Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., ion transport 2 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  109 bits (273), Expect = 6e-29
 Identities = 80/266 (30%), Positives = 143/266 (53%), Gaps = 23/266 (8%)

Query: 6   RKKLLEKVENTT--ETPMLILSVVYVVVALLPDIAVLSPDDLEFLDGLLWIVWGIFATEL 63
           ++ LL   +N T  E  M++LS++ V+V L+   A L  +    L  +   +  IF +  
Sbjct: 5   KRWLLPINQNPTPFELAMMLLSLISVIVVLMLTFAKLDGETRRLLFFIDTSICVIFISYF 64

Query: 64  LVKIFVSPKPLQYMMQNWPDVL--IVAMPFLRPLRFLRILLVLPKAWRQTKSVL------ 115
            + +F +     Y   +W D++  I A+  LR  RF +IL V+ +  R T+S+L      
Sbjct: 65  FINLFRAEDKRDYFRHHWIDLVASIPAIEALRLARFFQILRVI-RLIRMTRSILIPLMRQ 123

Query: 116 RQKTFSFIGLTSLSTVL-LSAAFVYLVEKGTPSP-INSYADALWWAMSTITTVGYGDMYP 173
           RQ+T     L ++ T+L L++  + LVE G P+  I++  +A+WWA+ TI+TVGYGD YP
Sbjct: 124 RQETTLASLLVAMVTILTLASVMILLVESGDPNANIHTAENAIWWALVTISTVGYGDYYP 183

Query: 174 VTGFGRGVAVFLMLTGITLFGLLTASVASFFVEDDTAKQDHLSLNLLLEKNQQLETQLN- 232
           VT  G  +   +++ G++ FG+++  +AS F+  D+ ++          ++QQ+  +L  
Sbjct: 184 VTTIGHFIGGLVIVCGVSFFGVISGYMASIFIAPDSKQRQE-------AQSQQMRDELEM 236

Query: 233 --QLVETQQPRKRFHLASYRRQLAER 256
             Q +E  Q      +A+ ++QL E+
Sbjct: 237 VLQRMEKNQETLLSEIATLKQQLNEK 262