Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., ion transporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.3 bits (238), Expect = 7e-25
 Identities = 65/257 (25%), Positives = 129/257 (50%), Gaps = 12/257 (4%)

Query: 18  ETPMLILSVVYVVVALLPDIAVLSPDDLEFLDGLLWIVWGIFATELLVKIFVSPKPLQYM 77
           E  M++LS++ V++ L+     L  +    L  +   +  IF       +F +   L Y+
Sbjct: 19  EIAMMLLSLLSVIIVLVMTFGRLDKETYRLLFFIDTTICMIFMVNFFAGLFRARDKLFYL 78

Query: 78  MQNWPDVLIVAMPFLRPLRFLRILLVLP--KAWRQTKSVL-------RQKTFSFIGLTSL 128
             +W D  I ++P +  LR  R+  +L   +  R ++S L       +Q T + + +  +
Sbjct: 79  RHHWID-FIASIPAIEALRIARVFQILRVIRLIRMSRSFLIPLIKQRKQATLASLLVAMV 137

Query: 129 STVLLSAAFVYLVEKGTPSP-INSYADALWWAMSTITTVGYGDMYPVTGFGRGVAVFLML 187
           + +  ++  + ++E GT    I +   A+WWA+ TI+TVGYGD YPV+  G  V   +++
Sbjct: 138 TILTFASIIILIIESGTEGANIQTAEQAIWWALVTISTVGYGDFYPVSTAGHIVGGIVIV 197

Query: 188 TGITLFGLLTASVASFFVEDDTAKQDHLSLNLLLEKNQQLETQLNQLVETQQPRKRFHLA 247
           +G++ FG+++  +AS FV  D +++         E   +LE  L ++ E Q+ +   + A
Sbjct: 198 SGVSFFGVISGYMASVFVAPDESERQERQDAHKAEIKSELELALARMEENQR-QMELNQA 256

Query: 248 SYRRQLAERETVRKNQK 264
               ++AE +   +++K
Sbjct: 257 QMLTKIAELKQALEDKK 273