Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., voltage-gated K+ channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 61/229 (26%), Positives = 116/229 (50%), Gaps = 33/229 (14%)

Query: 17  TETPMLILSVVYVVVALLPDIAVLSPDDLEFLDGLL--------WIVWGIFATELLVKIF 68
           ++TP   L  V ++  +L  + ++  + L+ L   L        ++    F  E L +I+
Sbjct: 27  SDTPSGKLFDVVLIGCILASVLLVIIESLKGLPSYLTTPFVVMEYLFTAFFTFEYLTRIY 86

Query: 69  VSPKPLQYMMQNWPDV-LIVAMPFLRPLRF--LRILLVLPKAWRQTKSVLRQKTFSFIG- 124
            SP+P +Y+   +  V L+  +P    L F   R LL++ +A+R  +     K F+F+  
Sbjct: 87  CSPRPKKYIFSFFGIVDLLATLPLYIGLIFPGARYLLII-RAFRLIRVFRVFKLFNFLNE 145

Query: 125 ----LTSLS-------------TVLLSA--AFVYLVEKGTP-SPINSYADALWWAMSTIT 164
               LT+L               +L+++    +Y++E   P S  N+  ++++WA+ T+T
Sbjct: 146 GERLLTALRESSKKIAVFFLFVVILVTSIGTLMYMIEGTLPNSQFNNIPNSIYWAIVTMT 205

Query: 165 TVGYGDMYPVTGFGRGVAVFLMLTGITLFGLLTASVASFFVEDDTAKQD 213
           TVGYGD+ PVTG G+ ++  +ML G T+  + T  V++  ++D   ++D
Sbjct: 206 TVGYGDITPVTGLGKFLSACVMLIGYTIIAVPTGIVSASMMKDYKRRRD 254