Pairwise Alignments

Query, 280 a.a., potassium channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., Ion transport protein (RefSeq) from Shewanella sp. ANA-3

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 25/206 (12%)

Query: 21  MLILSVVYVVVALLPDIAVLSPDDLEFLDGLLWIVWGIFATELLVKIFVSPKPLQY---- 76
           +++  V+ V +  L  +  +  D    +  L W+   IF  E  ++++ +  P+ Y    
Sbjct: 38  LMVCIVLSVALVFLDTVEAVHQDYGHIIRVLEWVFTLIFTIEYGLRLYCATHPVLYARSF 97

Query: 77  -----MMQNWPDVLIVAMP------------FLRPLRFLRILLVLPKAWRQTKSVLRQKT 119
                ++   P  L + +P              R  R L++L  L +     K++L+   
Sbjct: 98  YGLVDLLSVLPSYLALFIPGANFTLVIRVLRLFRIFRVLKLLRYLSEGNLLLKAMLQSSR 157

Query: 120 FSFIGLTSLSTVLLSAAFVYLVEKGTPSPINSYADALWWAMSTITTVGYGDMYPVTGFGR 179
             F+   S+S +++  + V  V +G  +  +S   +++W + TITTVGYGD+ P T  G+
Sbjct: 158 KVFLFFFSVSLIIMVLSAVMYVVEGPENGFSSIPKSVYWTIVTITTVGYGDITPKTELGQ 217

Query: 180 GVAVFLMLTGITLF----GLLTASVA 201
            +A F ML G ++     G+LTA ++
Sbjct: 218 AIAAFTMLLGYSIIAIPTGILTAEIS 243