Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella amazonensis SB2B

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 108 ATVNLGLALLPASLILPGLFVISAFVATAMGTSMGTIAAIAPVALGIAQAADLNLGLTA- 166
           A+ N+  ALLPA +     FV++   A A GTS GT   + P+A  +A  +  ++ L   
Sbjct: 379 ASGNIPFALLPAVM-----FVLAGLTAFATGTSWGTFGIMLPIAADMAMGSHTSMMLPML 433

Query: 167 GVVLSGAMFGDNLSIISDTTIAATRSQGCHMRDKFKENIRIALPAALLALVVFTFSSQTA 226
             VL+GA+FGD+ S ISDTTI ++    CH  D     +  AL  A+++L  +T    T 
Sbjct: 434 AAVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYALIVAVISLAGYTVMGFT- 492

Query: 227 QSPQTSDIEWLKVLPYLTILVLAVMGLNV 255
                 +  W        + VL+V+GL +
Sbjct: 493 ------ESVWAGFGTSSVLFVLSVIGLRI 515



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 43/229 (18%)

Query: 237 LKVLPYLTILVLAVMGLNVFLVLLVGILMAAGVGGLSDGYSLSA-------LTKDVYA-G 288
           L +LP +  +VLAV+   V L L +GIL   G   L+D   L++       +T  V++ G
Sbjct: 11  LSLLPPVVAIVLAVLTRKVLLSLGLGIL--TGTLLLNDFAPLASAEFLAHRVTNLVWSDG 68

Query: 289 FGNMQEIFLLS--MLIGGMGELMKQQGGLAFLTHHISRMIDKFARSHSDVQKMRASELGI 346
             N   +++L   +L+G +  L+   G                AR+ +D  + R      
Sbjct: 69  ALNSWNLYILGFLLLLGMITALITVSGA---------------ARAFADWARQRIRCKRD 113

Query: 347 AGLVALTNVCTA--NNTVAIIVSGGVAKELAEHNGVTAKRSASLLDIFS---CIMQGVLP 401
           A L+ +   C    ++    +V G +++ L +   ++  + A LLD  +   C++  V  
Sbjct: 114 AKLLTMFLGCVVFIDDYFNSLVVGSISRPLTDRYYISRAKLAYLLDSTAAPVCVISPVSS 173

Query: 402 YGAQAL-LLGSIFQMSPLS----------VVSYSYYCFFLAVAALVAVF 439
           +GA  + L+G I     +S          ++  ++Y  F  +  L   F
Sbjct: 174 WGAYIIALIGGILASHGMSDAGHLSVFIQMIPMNFYAIFALLLLLCVAF 222