Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 126 LFVISAFVATAMGTSMGTIAAIAPVALGIAQAADLNLGLTAGVVLSGAMFGDNLSIISDT 185
           +F+  + +A A G+S G  A   P+ + +AQA + ++ L  G +LS + FG      SD+
Sbjct: 363 VFLTMSILAFATGSSWGIFAVSIPIVMPLAQAVNADIPLVIGALLSASSFGSQACFYSDS 422

Query: 186 TIAATRSQGCHMRDKFKENIRIALPAALLALVVF 219
           T+ A +   C++       +  AL AA L  + F
Sbjct: 423 TVLAAQGSDCNLVSHAVTQLPYALLAAGLTFIGF 456



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 232 SDIEWLKVLPYLTILVLAVMGLNVFLVLLVGILMAAGVGGLSDGYSLSALTKDVYAGFGN 291
           SD   L ++P + +LVLAV      L L++G L+  G+        L+  + D+      
Sbjct: 2   SDATALSLIPPVVVLVLAVWLRRPILSLIIGALV--GLVLYQPDQVLNNFS-DISLSVMA 58

Query: 292 MQEIFLLSMLIGGMGE----LMKQQGGLAFLTH 320
            + I  L ++ GG G     L+K  G +AF  H
Sbjct: 59  DETIGWLILVCGGFGALIALLVKTGGSMAFGRH 91