Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Na+/H+ antiporter NhaC (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  445 bits (1145), Expect = e-129
 Identities = 234/437 (53%), Positives = 307/437 (70%), Gaps = 12/437 (2%)

Query: 12  PNAFALLPLMVFLLLFMGVGSYLTWQGVEFAFYQLPAPVAVLPAVVLAIALSKES----- 66
           PN  ALLPL +FL+LF+G G  L   G E AFYQL   VA+LPA+ LA+ L ++      
Sbjct: 16  PNPVALLPLFLFLVLFIGAGLALGAAGTEMAFYQLSPTVAILPAIALALVLREKDQATAA 75

Query: 67  ----LNRAIEQFLRGVGHSDIMAMCIIYLLAGAFAAVAKATGGVDATVNLGLALLPASLI 122
               L R +  FL G G  +I+ MC+IYLLAG FA+VA A GGV++TVNLGL+L+P  L+
Sbjct: 76  RSGGLTRRVNVFLSGAGEINIVTMCVIYLLAGGFASVASAIGGVESTVNLGLSLVPQRLV 135

Query: 123 LPGLFVISAFVATAMGTSMGTIAAIAPVALGIAQAADLNLGLTAGVVLSGAMFGDNLSII 182
           LPGLFVISAFVATAMGTSMGTIAA+ P+A G+A    ++  L  G V+ GAMFGDNLS+I
Sbjct: 136 LPGLFVISAFVATAMGTSMGTIAAVGPIAAGVAAQTGMDAALLMGAVVGGAMFGDNLSMI 195

Query: 183 SDTTIAATRSQGCHMRDKFKENIRIALPAALLALVVFTFSSQTAQSPQTSDIEWLKVLPY 242
           SDTTIAATR+QGC MRDKF+ N  IALPAALLA+ VF  +    ++    D     VLPY
Sbjct: 196 SDTTIAATRTQGCDMRDKFRMNFAIALPAALLAVTVFWLAGDAGRAAAPGDYRVFTVLPY 255

Query: 243 LTILVLAVMGLNVFLVLLVGILMAAGVG-GLSDGYSLSALTKDVYAGFGNMQEIFLLSML 301
           + IL +A++G+NVF+VL  GI +A GVG  + DGY+     +D+Y GF  M EI +LSML
Sbjct: 256 VAILAMALLGMNVFVVLFAGIALAGGVGMAVVDGYTPLKFAQDIYKGFTGMHEILVLSML 315

Query: 302 IGGMGELMKQQGGLAFLTHHISRMIDKFARSHSDVQKMRASELGIAGLVALTNVCTANNT 361
           +GG+GEL++ QGG+A+L   + R ID            R  E GI+GLVA+ ++CTANNT
Sbjct: 316 MGGLGELIRYQGGVAWLLAAVRRFID--WPGERGGAAARTGEAGISGLVAVADLCTANNT 373

Query: 362 VAIIVSGGVAKELAEHNGVTAKRSASLLDIFSCIMQGVLPYGAQALLLGSIFQMSPLSVV 421
           VAII++GG+A+E+A  +GV  +RSASLLDIFSC++QG+ P+ AQ LL GSI  +SP++V+
Sbjct: 374 VAIILTGGMAREIAATSGVDPRRSASLLDIFSCVVQGLAPHAAQVLLAGSIAGISPVAVL 433

Query: 422 SYSYYCFFLAVAALVAV 438
           S +YYC  L  A ++A+
Sbjct: 434 SANYYCLLLGAAGVLAI 450