Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Na+/H+ antiporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  530 bits (1366), Expect = e-155
 Identities = 260/438 (59%), Positives = 352/438 (80%), Gaps = 3/438 (0%)

Query: 6   SSKPQQPNAF-ALLPLMVFLLLFMGVGSYLTWQGVEFAFYQLPAPVAVLPAVVLAIALSK 64
           ++ P  P +F ALLPL VFL LF+G G Y   QGV+FAFYQLP+ +A++PA++LA+ LSK
Sbjct: 7   TTAPNNPASFVALLPLFVFLSLFIGAGVYFQSQGVDFAFYQLPSVIAIMPAIILALVLSK 66

Query: 65  ESLNRAIEQFLRGVGHSDIMAMCIIYLLAGAFAAVAKATGGVDATVNLGLALLPASLILP 124
           + LN AI+ F+ G+GHS+I+AMC+IYLLAG FAAVAKATGGVDATV LGL+L+P++L+LP
Sbjct: 67  QKLNHAIDTFIGGIGHSNIIAMCLIYLLAGGFAAVAKATGGVDATVALGLSLIPSNLLLP 126

Query: 125 GLFVISAFVATAMGTSMGTIAAIAPVALGIAQAADLNLGLTAGVVLSGAMFGDNLSIISD 184
           G FVI+AF+ATAMGTSMGTIAA+AP+ALG+A  A ++  L AG V+SGA+FGDNLSIISD
Sbjct: 127 GFFVIAAFIATAMGTSMGTIAAVAPIALGVADQAQIDYALMAGAVMSGALFGDNLSIISD 186

Query: 185 TTIAATRSQGCHMRDKFKENIRIALPAALLALVVFTFSSQTAQSPQTSDIEWLKVLPYLT 244
           TTIAATR+QGC M+DKF+EN+  A+PA+LL  V F  + Q        +++++KV+PYLT
Sbjct: 187 TTIAATRTQGCDMKDKFRENLIFAIPASLLTFVAFVIAGQGQAELAAQEVDFIKVIPYLT 246

Query: 245 ILVLAVMGLNVFLVLLVGILMAAGVGGLSDGYSLSALTKDVYAGFGNMQEIFLLSMLIGG 304
           ILVLAV GLNVF+VL +GIL+A   G ++  Y +    KD+YAGF NMQEIF+LSML+GG
Sbjct: 247 ILVLAVAGLNVFVVLTLGILLAGATGFITMDYGVIQFGKDIYAGFSNMQEIFILSMLVGG 306

Query: 305 MGELMKQQGGLAFLTHHISRMIDKFARSHSDVQKMRASELGIAGLVALTNVCTANNTVAI 364
           +  LM+QQGGLAF++  I ++I +F+++  +    RA+ELG+AG+VA+TN C ANNTV+I
Sbjct: 307 LAALMQQQGGLAFVSKQIEKLIARFSKAQGEA-SCRAAELGMAGIVAVTNSCVANNTVSI 365

Query: 365 IVSGGVAKELAEHNGVTAKRSASLLDIFSCIMQGVLPYGAQALLLGSIFQMSPLSVVSYS 424
           +V+G +AK+LAE +GVT KR+AS+LDIF+CI+QG++PYGAQALL+ S F ++PL+ VS++
Sbjct: 366 VVTGDIAKDLAEKHGVTPKRAASVLDIFACIIQGLIPYGAQALLIASTFSITPLAAVSHA 425

Query: 425 YYCFFL-AVAALVAVFRR 441
           +YC  L AVA  + +FR+
Sbjct: 426 WYCMILAAVAIAIVIFRK 443