Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., Na+/H+ antiporter NhaC (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 96/429 (22%), Positives = 172/429 (40%), Gaps = 40/429 (9%)

Query: 50  VAVLPAVVLAIALSKESLNRAIEQFLRGVGHSDIMAMCIIYLLAGAFAAVAKATGGVDAT 109
           V V  A+ L I  S E L    E  L  VG   I     I +L G   A   A+G +   
Sbjct: 44  VVVAGAMCLRIGYSWEELQ---EGMLSAVGRIQIAVA--ILMLVGMIIAAWMASGTIPTI 98

Query: 110 VNLGLALLPASLILPGLFVISAFVATAMGTSMGTIAAIAPVALGIAQAADLNLGLTAGVV 169
           +  GL L+  +  L    ++ A  + A GTS GT+  I    LG+  A   +   T G +
Sbjct: 99  IYWGLKLIAPNHFLVSTIILCAVASLATGTSFGTMGTIGVALLGVGTAMGYDPAWTVGAI 158

Query: 170 LSGAMFGDNLSIISDTTIAATRSQGCHMRDKFKENIRIALPAALLALVVFTF--SSQTAQ 227
           +SGA FGD +S +SD+T  A       +       +   LPA +++++ +    S  T  
Sbjct: 159 VSGAYFGDKMSPVSDSTNIAAAVCEVPLFTHIASMLWTTLPALVVSIIGYAILGSMHTGT 218

Query: 228 SPQTSDIEWL-------------KVLPYLTILVLAVMGLNVFLVLLVGILMAAGVGGLSD 274
           +    +I  +              ++P + ++VLA   L V  V++V ++ A  +  L +
Sbjct: 219 AESVGNINTILTTLEGSFSLSPVALIPPVLMIVLAYKRLPVLPVMVVCVVSALAI-ALFE 277

Query: 275 GYSLSALTKDVYAGFGNMQEIFLLSMLI--GGMGELMKQQ---------GGLAFLTHHIS 323
           G S+  L K +  G+        L+ L+  GG+  +M            GG+      + 
Sbjct: 278 GVSVVNLAKFLTTGYKAATPSPELNKLLSCGGLMSIMATTLLLTCGMAFGGILEKARVLE 337

Query: 324 RMIDKFARSHSDVQKMRASELGIAGLVALTNVCTANNTVAIIVSGGVAKELAEHNGVTAK 383
            ++D   R  +    +  + +  A ++      T +  +A++V G    E     G+   
Sbjct: 338 VLLDAILRGATSAVSLVGATVAAAYIILFG---TGSQMLAVVVPGRAFGESFRRAGIEQV 394

Query: 384 RSASLLDIFSCIMQGVLPYGAQALLLGSIFQMS-----PLSVVSYSYYCFFLAVAALVAV 438
             +   +    +   ++P+   A  +  +  +S     P + ++Y    F +A A     
Sbjct: 395 VLSRTCEDAGTLGCPLVPWSVHAFYILGVLGVSATDYMPYAFLNYLVPVFSMACAITGIG 454

Query: 439 FRRHTMRNA 447
             R T +NA
Sbjct: 455 IMRTTPKNA 463



 Score = 24.6 bits (52), Expect = 0.007
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 257 LVLLVGILMAAGVGGLSDGYSLSALTKDVYAGFGNMQEIFLLSMLIG 303
           L LLV +++A G   L  GYS   L + + +  G +Q    + ML+G
Sbjct: 38  LPLLVAVVVA-GAMCLRIGYSWEELQEGMLSAVGRIQIAVAILMLVG 83