Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Na(+)/H(+) antiporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 86/391 (21%), Positives = 164/391 (41%), Gaps = 47/391 (12%)

Query: 88  IIYLLAGAFAAVAKATGGVDATVNLGLALLPASLILPGLFVISAFVATAMGTSMGTIAAI 147
           II L+ GA + +   +G V   +  G+ ++  S  L    +I   ++   G+S  TIA I
Sbjct: 79  IILLIIGALSGIWMISGVVPTLIYYGMQIIHPSFFLTSTCIICVLISVMTGSSWTTIATI 138

Query: 148 APVALGIAQAADLNLGLTAGVVLSGAMFGDNLSIISDTTIAATRSQGCHMRDKFKENIRI 207
               +GI +A     G  AG ++SGA FGD +S +S+TTI A       +    +  +  
Sbjct: 139 GIALMGIGKAQGFEEGWIAGAIISGAYFGDKVSPLSETTILAASVTDTPLFRHIRYMMIT 198

Query: 208 ALPAALLALVVFTFSSQTAQSPQTSDI--------------EWLKVLPYLTILVLAVMGL 253
            +P+ ++ L++FT +  +  +  T  I               WL ++P  T +++A    
Sbjct: 199 TVPSLIITLIIFTVAGLSHDASNTQHIAEVAAALNEKFHITPWLLIIPIATGILIARKVP 258

Query: 254 NVFLVLLVGILMAAGVGGLSDGYSLSALTKDVYAGFGNMQEIFL-LSMLIGGMGELMKQQ 312
           ++  + L  +L  AG+  L   +    L +   A   N   +F  L M I G   L    
Sbjct: 259 SIITLFLSTLL--AGIFALI--FQPDLLREISGAAVSNFDSLFKGLMMTIYGKTSLQTDN 314

Query: 313 GGLAFL--THHISRMIDKF-----------ARSHSD---------VQKMRASELGIAGLV 350
             L  L  T  +S M++             A + S          V+ M+ +   ++  V
Sbjct: 315 AVLTDLIATRGMSGMMNTIWLILCAMCFGGAMTASGMLGSITSLFVRFMKKTVSVVSATV 374

Query: 351 A---LTNVCTANNTVAIIVSGGVAKELAEHNGVTAKRSASLLDIFSCIMQGVLPYGAQAL 407
                 N+ TA+  ++II++G + +++    G  +   +   +    +   ++P+    +
Sbjct: 375 CSGLFLNLATADQYISIILTGNMFRDIYAKKGYESCLLSRTTEDSVTVTSVLIPWNTCGM 434

Query: 408 LLGSIFQMSPLSVVSYSYYCFFLAVAALVAV 438
              +I  +  L    Y  YCFF  ++ L+++
Sbjct: 435 TQATILSVPTL---VYLPYCFFNIISPLMSI 462