Pairwise Alignments

Query, 447 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella sp. ANA-3

 Score =  533 bits (1373), Expect = e-156
 Identities = 263/438 (60%), Positives = 353/438 (80%), Gaps = 3/438 (0%)

Query: 6   SSKPQQPNAF-ALLPLMVFLLLFMGVGSYLTWQGVEFAFYQLPAPVAVLPAVVLAIALSK 64
           ++ P  P +F ALLPL VFL LF+G G Y   QGV+FAFYQLP+ +A+LPA++LA+ LSK
Sbjct: 7   TTAPSSPASFIALLPLFVFLSLFIGAGVYFQSQGVDFAFYQLPSVIAILPAIILALVLSK 66

Query: 65  ESLNRAIEQFLRGVGHSDIMAMCIIYLLAGAFAAVAKATGGVDATVNLGLALLPASLILP 124
           + LN+AI+ F+ G+GHS+I+AMC+IYLLAG FAAVAKATGGVDATV LGL+L+P++L+LP
Sbjct: 67  QKLNQAIDTFIGGIGHSNIIAMCLIYLLAGGFAAVAKATGGVDATVALGLSLIPSNLLLP 126

Query: 125 GLFVISAFVATAMGTSMGTIAAIAPVALGIAQAADLNLGLTAGVVLSGAMFGDNLSIISD 184
           G FVI+AF+ATAMGTSMGTIAA+AP+ALG+A  A ++  L AG V+SGA+FGDNLSIISD
Sbjct: 127 GFFVIAAFIATAMGTSMGTIAAVAPIALGVADQAQIDYALMAGAVMSGALFGDNLSIISD 186

Query: 185 TTIAATRSQGCHMRDKFKENIRIALPAALLALVVFTFSSQTAQSPQTSDIEWLKVLPYLT 244
           TTIAATR+QGC M+DKF+EN+  A+PA+LL  V F  + Q        DI+++KV+PYLT
Sbjct: 187 TTIAATRTQGCDMKDKFRENLIFAIPASLLTFVAFVIAGQGQADLAAQDIDFIKVIPYLT 246

Query: 245 ILVLAVMGLNVFLVLLVGILMAAGVGGLSDGYSLSALTKDVYAGFGNMQEIFLLSMLIGG 304
           ILVLAV GLNVF+VL +GIL+A   G L+  Y +    KD+YAGF NMQEIF+LSML+GG
Sbjct: 247 ILVLAVAGLNVFVVLTLGILLAGAAGFLTMDYGVIQFGKDIYAGFSNMQEIFILSMLVGG 306

Query: 305 MGELMKQQGGLAFLTHHISRMIDKFARSHSDVQKMRASELGIAGLVALTNVCTANNTVAI 364
           +  LM+QQGGLAF++  I ++I +F+++  +    RA+ELG+AG+VA+TN C ANNTV+I
Sbjct: 307 LAALMQQQGGLAFVSKQIEKLITRFSKAQGEA-SCRAAELGMAGIVAVTNSCVANNTVSI 365

Query: 365 IVSGGVAKELAEHNGVTAKRSASLLDIFSCIMQGVLPYGAQALLLGSIFQMSPLSVVSYS 424
           +V+G +AK+LAE +GV+ KR+AS+LDIF+CI+QG++PYGAQALL+ S F ++PL+ VS++
Sbjct: 366 VVTGDIAKDLAEKHGVSPKRAASVLDIFACIIQGLIPYGAQALLIASTFSITPLAAVSHA 425

Query: 425 YYCFFL-AVAALVAVFRR 441
           +YC  L AVA  + +FR+
Sbjct: 426 WYCMILAAVAIAIVIFRK 443