Pairwise Alignments

Query, 331 a.a., 2-hydroxyacid dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., D-3-phosphoglycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (267), Expect = 5e-28
 Identities = 85/301 (28%), Positives = 139/301 (46%), Gaps = 21/301 (6%)

Query: 27  SLHFHDFRLTDKTA-QMAKGCEVVCAFVNDELHASVLEQLYQGGTRLIAMRC--AGFDKV 83
           ++ +H   L D+   +  K    +      +L A VL++      +LIA+ C   G ++V
Sbjct: 34  NIEYHKASLGDEALHESIKDAHFIGIRSRTQLSADVLKR----AEKLIAIGCFCIGTNQV 89

Query: 84  DLEAAKRLGMQVVRVPAYSPEAVAEHTVGMMLCLNRRFHKAYQRTRDANFSLDGLVGFNF 143
           DL  A+ LG+ V   P  +  +VAE  +G ++ L R   +         +       +  
Sbjct: 90  DLATAESLGIPVFNAPFSNTRSVAELVLGEIIMLMRGIPERNAIAHRGGWMKTAAGSYEV 149

Query: 144 HGKTVGVIGSGKIGVATMRILQGLGMQILCFDPYPNPDAIALG--ARYVELSELFAQSDV 201
            GKT+GVIG G IG     + + LGM+++ FD     D + LG   +   + +L AQ+DV
Sbjct: 150 RGKTLGVIGYGHIGTQLGILAETLGMRVVFFDI---EDKLPLGNAQQIHSMEQLLAQADV 206

Query: 202 ITLHCPMSKENYHLLNESAFDQMKDGVMIINTSRGELLDSVAAIEALKRGRIGALGLDVY 261
           ++LH P + +   +++ + F  M+ G + IN SRG ++D  A   ALK   +    +DV+
Sbjct: 207 VSLHVPETPQTKDMISTAEFAAMRKGSIFINASRGTVVDIDALTVALKERHLAGAAIDVF 266

Query: 262 DNEKDLFFQDKSNDVIVDDVFRRLSACHNVLFTGHQAFLTEDALNNIAQTTLNNIQLFFD 321
             E       +SND   D+    L    NVL T H    T +A  NI       +  + D
Sbjct: 267 PVE------PQSND---DEFISPLRGLDNVLLTPHVGGSTAEAQENIGIEVAGKLAKYSD 317

Query: 322 N 322
           N
Sbjct: 318 N 318