Pairwise Alignments

Query, 334 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain from Pseudomonas stutzeri RCH2

 Score =  276 bits (706), Expect = 5e-79
 Identities = 147/328 (44%), Positives = 214/328 (65%), Gaps = 6/328 (1%)

Query: 5   VLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPELDGFE 64
           +LICDDS LARKQ+  +LPA     ++ A  G++A+  + +    ++ LDLTMPE+DG++
Sbjct: 6   LLICDDSSLARKQLLHALPAGWPVTVSQAATGVEALDRIRQGDIDVLLLDLTMPEMDGYQ 65

Query: 65  TLEAMGKKGYTTPVVVVSGDIQPKAKERVLALGAKAFIQKPIDKNVLNDVLKMLVEPPTQ 124
            L  + ++      +V+S DIQ +A  RVLALGA+AFI+KP D   L   L  L      
Sbjct: 66  VLAQLREEQLECKTIVISADIQEEAVRRVLALGARAFIKKPADPVHLRQTLASLGLLDDV 125

Query: 125 PRIVTPVSVELPILKRRDIYMEVANVSIGRAADALARHFDVFVQLPLPNVNIFEVSELHM 184
             ++T V  E   +  RD + EV N+++GRAA  LAR   VF+QLP+PNVNI EV ELHM
Sbjct: 126 SALITRVDGER--ISFRDTFREVVNIAMGRAAALLARVLGVFIQLPIPNVNILEVGELHM 183

Query: 185 ALRDLAENSQVSGVCQGFSGEGIAGEALVLLSDSSVADLKKLMKVPVDSEDLQELELLMD 244
           AL D A   +++ VCQG+ G GIAGEAL+L  DS VAD+ +LM+     +D  E+E+L+D
Sbjct: 184 ALADAARGEKLTAVCQGYIGGGIAGEALLLFHDSEVADMARLMR----RQDYLEMEMLLD 239

Query: 245 VSNILVGSFLNGLGHQAEVRFFQSSPVLLGQHISIDSVIQSTEGAFKKTMTFEVSYNIEG 304
           +S++L+ + L+G+  Q EV F Q  P +LGQH SI+ +I+   G +KKT+  E+SY++EG
Sbjct: 240 LSSLLISACLSGIAEQIEVVFSQGHPQVLGQHASIEELIRINSGRWKKTLAVEISYSLEG 299

Query: 305 TSIRCDLLFMFVDESLPLLDNKLSYLME 332
             I  DLL +F ++S+ LL  KL++LM+
Sbjct: 300 HDIHFDLLLLFTEDSVELLTRKLAHLMD 327