Pairwise Alignments

Query, 334 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 719 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score = 58.9 bits (141), Expect = 4e-13
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 4/134 (2%)

Query: 5   VLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPELDGFE 64
           +L+ DD P     M   L  + +  I  A  G++A+ +L +Q   L+ LD+ MP +DGFE
Sbjct: 22  LLVVDDYPENLVTMCAVLQRT-DWHIVTASSGIEALTVLLEQEVDLVLLDVQMPGMDGFE 80

Query: 65  TLEAM--GKKGYTTPVVVVSGDIQPK-AKERVLALGAKAFIQKPIDKNVLNDVLKMLVEP 121
               M   ++   TP++ ++ + Q + A ++  A GA  ++ KP D NVL   ++ L+E 
Sbjct: 81  VARLMRGSQRTRLTPIIFLTANEQTQDAVQKGYANGATDYLFKPFDPNVLKPKVQTLLEQ 140

Query: 122 PTQPRIVTPVSVEL 135
               R +  +S+EL
Sbjct: 141 QRNRRALQQLSLEL 154