Pairwise Alignments

Query, 334 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 903 a.a., PAS domain S-box protein from Rhodopseudomonas palustris CGA009

 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 2   SFPVLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPELD 61
           S  +L+ DD  + R  + +++      D+  A  G  A+ ++  +++ L+F+D+ M E+D
Sbjct: 645 SVKILVVDDVEMNR-DLCKTMLTRAGHDVDLADSGATAIAMVASRTYDLVFMDVQMGEMD 703

Query: 62  GFET---LEAMGKKGYTTPVVVVSGDIQPKAKERVLALGAKAFIQKPIDK 108
           G E    + A+G      P++ ++ ++ P+  ER  A G    + KPI++
Sbjct: 704 GLEATRRIRALGHAYRDVPIIALTANVLPEQVERYKAAGVDGHLGKPINR 753