Pairwise Alignments

Query, 334 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  293 bits (749), Expect = 5e-84
 Identities = 151/335 (45%), Positives = 225/335 (67%), Gaps = 7/335 (2%)

Query: 1   MSFPVLICDDSPLARKQMARSLPASLNADITFAVHGLDAMGILEKQSFKLMFLDLTMPEL 60
           M+  VLICDDS +ARKQMAR+LP   + +IT+A +G + +  +     +++FLDL MP +
Sbjct: 1   MTISVLICDDSAMARKQMARTLPKEWDVEITYATNGAEGLDAIRAGKGEVVFLDLNMPVM 60

Query: 61  DGFETLEAMGKKGYTTPVVVVSGDIQPKAKERVLALGAKAFIQKPIDKNVLNDVLKML-V 119
           DG+E L+ + +      ++VVSGDIQ KA ERV ALGA  FIQKP+  + ++++L+   +
Sbjct: 61  DGYEVLQTVQQNDLPALIIVVSGDIQIKAHERVKALGALDFIQKPVSADAISNILQEYGI 120

Query: 120 EPPTQPRIVTPVSVELPILK--RRDIYMEVANVSIGRAADALARHFDVFVQLPLPNVNIF 177
              TQ   V     + P++K   RD   E+ANV++GRAAD LA+  DVFV LP+PNVN+ 
Sbjct: 121 LTLTQKDQVE----DTPMIKVDMRDACQEIANVAMGRAADLLAKLLDVFVLLPIPNVNVL 176

Query: 178 EVSELHMALRDLAENSQVSGVCQGFSGEGIAGEALVLLSDSSVADLKKLMKVPVDSEDLQ 237
           EVSEL MAL+   E+S VS +CQGF G G+AGEAL+L  DSS  D+ KLM V    +   
Sbjct: 177 EVSELTMALKATEESSTVSALCQGFIGAGVAGEALLLFHDSSFQDMAKLMGVANPEDKQT 236

Query: 238 ELELLMDVSNILVGSFLNGLGHQAEVRFFQSSPVLLGQHISIDSVIQSTEGAFKKTMTFE 297
           E+E+L+D  N+L+G+FLNG+  Q +++F Q+ PV+LG+H +++ +I      + +T+  E
Sbjct: 237 EIEVLIDTGNVLIGAFLNGISEQLDMKFSQAHPVVLGRHCTVNDLIHDNSEKWHRTLAME 296

Query: 298 VSYNIEGTSIRCDLLFMFVDESLPLLDNKLSYLME 332
           ++Y IE  +I+CDLL +F ++S+P L  KL YL++
Sbjct: 297 INYRIENHNIQCDLLLLFTEDSIPTLSYKLGYLLD 331