Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Type IV fimbriae expression regulatory protein PilR from Pseudomonas fluorescens FW300-N2E2

 Score =  243 bits (619), Expect = 1e-68
 Identities = 137/325 (42%), Positives = 199/325 (61%), Gaps = 15/325 (4%)

Query: 194 IIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCAA 253
           ++G+S PML+++  I+ +A SQ  + I GE+G GKELVAR IH++  R   P V VNC A
Sbjct: 138 LLGDSPPMLSVRKQIEKLARSQAPVYISGESGCGKELVARLIHEQGPRANLPFVPVNCGA 197

Query: 254 IPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQNH 313
           IP  L+ESE FGH KG+F+GA   + G F  A GGTLFLDE+ +LPL+ Q K+LRA+Q  
Sbjct: 198 IPTELMESEFFGHRKGSFSGAIEDKPGLFQAAHGGTLFLDEVADLPLAMQVKLLRAIQEK 257

Query: 314 EIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDLS 373
            ++ VG  + + VDVRIL AT++DL  EV AGRFR DLY+RL+V  + VPPLRER+ D+ 
Sbjct: 258 AVRAVGGQQEEVVDVRILCATHKDLDGEVAAGRFRQDLYYRLNVIELRVPPLRERREDIE 317

Query: 374 LLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQRGRP 433
           LLA + +++     G   +KLH   L  L  Y +PGNVRELE+++ RA    + +Q    
Sbjct: 318 LLANHMLQRLAANTGSPPVKLHPQALDALRSYRFPGNVRELENMLERAYTLCEQQQ---- 373

Query: 434 VTTLKVEDLGELQGPRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQRHLISETLTQADF 493
              ++ +DL   +G  +A        EP   + +    L D  ++ +R LI + L +  +
Sbjct: 374 ---IEADDLRLAEGNGSA--------EPGNPDLMQVDNLEDYLEDVERKLILQALEETRW 422

Query: 494 NWAEAARRLQTDRANLTRLAKRLGI 518
           N   AA+RL+    ++    K+LG+
Sbjct: 423 NRTAAAQRLKLSFRSMRYRLKKLGL 447