Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains from Pseudomonas stutzeri RCH2

 Score =  416 bits (1068), Expect = e-120
 Identities = 228/497 (45%), Positives = 315/497 (63%), Gaps = 9/497 (1%)

Query: 22  NEERFHRLLDAVRKAVICDCVVLMSLHNDTLTPLAMQGLTRDTLGRRFVVSEHPRLAQIC 81
           N  R  RL+  +++   C  VVL+ L  D+L PLA  GL ++ LGRRFV+++HPRLA I 
Sbjct: 17  NAVRLQRLVHTLQQRFRCGAVVLLRLDEDSLRPLAAVGLVQEALGRRFVIAQHPRLAAIL 76

Query: 82  SADLPVRFAADCPLPDPFDGLLLDSE--DDLPMHSCMGLPLHFGEQLLGILTLDSLKPDA 139
           S   P  F  D  LPDP+DGLL D+   + LP+H CMG+ L+   +L G LTLD+L    
Sbjct: 77  SQREPTWFEPDSRLPDPYDGLL-DAHIGEPLPVHDCMGVSLYVEGKLWGALTLDALHAGT 135

Query: 140 FDHLSPRSLEILAAIAAATLKMTLTFSELENQAKQTQLRLEELNQEAWSRDSVEIIGNSG 199
           FD  + R L+    +  A +++T     LE++ +  +L   ++ +        EI+G S 
Sbjct: 136 FDDDARRDLQRYTLVIEAAVRVT----RLEHENRGLRLARSDVMETTLDHGDGEILGQSD 191

Query: 200 PMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCAAIPENLL 259
            +  +  ++ VVA S+  +L+ GETGVGKEL AR +H+ S R+ +PLV+VNCAA+PE+L 
Sbjct: 192 VIRELLRELQVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVHVNCAALPESLA 251

Query: 260 ESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQNHEIQPVG 319
           ESELFGHVKGAF+GA   R G+F  A+GGTL LDE+GELPL+ Q+K+LR LQN EIQ +G
Sbjct: 252 ESELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLRTLQNGEIQRLG 311

Query: 320 QDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDLSLLAGYF 379
            D+ + VDVRI+AATNR+L++ V  G FRADLYHRLSVYP  +PPLRER  D+ +LAG+F
Sbjct: 312 ADKPRQVDVRIIAATNRNLRESVRDGHFRADLYHRLSVYPAPIPPLRERGNDVLILAGHF 371

Query: 380 VEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQRGRPVTTLKV 439
           +E  R +LG+  ++L       L+ Y WPGNVRELEHV++RAAL+  +R   R       
Sbjct: 372 LELNRARLGLRSMRLSPAAERALLGYSWPGNVRELEHVVSRAALRLLSRGASRSEILTLE 431

Query: 440 EDLGELQGPRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQRHLISETLTQADFNWAEAA 499
            DL +L      +      +EP++ + +  L LR   D  QR  I   L  +  NWA+AA
Sbjct: 432 PDLLDLDSHAVGVTASQVVEEPVIADEV--LPLRHTVDAAQRQAIVRALEASGENWAQAA 489

Query: 500 RRLQTDRANLTRLAKRL 516
           R L  D +NL +LA+RL
Sbjct: 490 RLLDVDPSNLHKLARRL 506