Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., nif-specific transcriptional activator NifA from Rhodopseudomonas palustris CGA009

 Score =  233 bits (595), Expect = 1e-65
 Identities = 138/343 (40%), Positives = 209/343 (60%), Gaps = 15/343 (4%)

Query: 94  PLPDPFDGLLLDSEDDLPMHSCMGLPLHFGEQLLGILTLDSLKPDAFDHL----SPRSLE 149
           P+    D + L + D++ + S +G+P+    +++G L++D ++ D   H       R L 
Sbjct: 121 PMFTAADAMALGATDEIRV-SFIGVPIRIDSRVVGTLSIDRVR-DGRSHFRMDADVRFLT 178

Query: 150 ILAAIAAATLKMTLTFSE----LENQAKQTQLRLEELNQEAWSRDSVE---IIGNSGPML 202
           ++A +   T+K+    +     L  ++ + Q  L EL  E   R  V+   I+G S  + 
Sbjct: 179 MVANLIGQTVKLHRVVARDRERLMAESHRLQKELSELKPER-ERKRVKVDGIVGESPAIR 237

Query: 203 AMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCAAIPENLLESE 262
            + A + ++A SQ  +L+ GE+G GKEL+A+ IH+ S R   P + +NCAA+PE++LESE
Sbjct: 238 KLLAKVSIIAKSQSPVLLRGESGTGKELIAKAIHELSARANGPFIKINCAALPESVLESE 297

Query: 263 LFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQNHEIQPVGQDR 322
           LFGH KGAFTGA  +R G+F LAD GTLFLDEIGE+  S Q+K+LR LQ  E + VG ++
Sbjct: 298 LFGHEKGAFTGAIASRKGRFELADKGTLFLDEIGEISASFQAKLLRVLQEQEFERVGGNQ 357

Query: 323 VQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDLSLLAGYFVEQ 382
              V+VRI+AATNR+L++ V    FRADLY+R++V P+ +PPLR+R  D+ LLA  F++ 
Sbjct: 358 TIKVNVRIVAATNRNLEEAVARKEFRADLYYRINVVPMILPPLRDRPSDIPLLASEFLKN 417

Query: 383 ARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKA 425
             ++ G  +L      L  L    +PGNVRELE+ + R A  A
Sbjct: 418 FNKENG-RELAFESHALDLLKACSFPGNVRELENCVRRTATLA 459