Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  229 bits (583), Expect = 2e-64
 Identities = 127/312 (40%), Positives = 182/312 (58%), Gaps = 19/312 (6%)

Query: 208 IDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCAAIPENLLESELFGHV 267
           I++VAP+  +++I GE+G GKE  ART+HQ+S R  +P V ++C A+ ++L  SELFGHV
Sbjct: 149 INLVAPTDMSVIIQGESGTGKEFAARTLHQQSKRADKPFVAIDCGALSKDLAASELFGHV 208

Query: 268 KGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQNHEIQPVGQDRVQTVD 327
           KGAFTGA   + G+F  A+GGTLFLDE+G L    Q K+LRALQ   IQP+G  +   V+
Sbjct: 209 KGAFTGALNDKKGQFEAANGGTLFLDEVGNLSYEVQIKLLRALQERVIQPLGSTKQIPVN 268

Query: 328 VRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDLSLLAGYFVEQARRKL 387
           VRI+ ATN DL   ++ G FR DLYHRL+ + I +PPLR+R GDL L   +F++ + R L
Sbjct: 269 VRIITATNDDLANSMQQGEFREDLYHRLNEFKIQLPPLRDRGGDLELFINHFIQLSNRDL 328

Query: 388 GITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQRGRPVTTLKVEDLGELQG 447
                 +  +  + L+ Y WPGN+REL +VI R  L             L   D+ ++  
Sbjct: 329 ERNVKSVSSEAKALLLSYDWPGNLRELSNVIKRMVL-------------LSPGDVAQINA 375

Query: 448 -PRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQRHLISETLTQADFNWAEAARRLQTDR 506
            P   M+    Q  P          L+   ++ ++ LI+ETL +   N ++AA+ L  DR
Sbjct: 376 LPDEMMISVHHQSAPG-----NSSDLKAVNEQNEKALITETLIKVRHNKSKAAKILNIDR 430

Query: 507 ANLTRLAKRLGI 518
             L    +R GI
Sbjct: 431 KTLYAKMERYGI 442