Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  250 bits (639), Expect = 8e-71
 Identities = 145/299 (48%), Positives = 193/299 (64%), Gaps = 11/299 (3%)

Query: 134 SLKPDAFDHLS-PRSLEILAAIAAATLKMTLTFSELENQAKQTQLRLEELNQEAWSRDSV 192
           ++K  AFD+L+ P   E L A+    L+    F  L  + +  + RL + +  A      
Sbjct: 91  AMKKGAFDYLTKPADNEELTAV----LEKAWDFGRLLEENENLRRRLSDDDPTA------ 140

Query: 193 EIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCA 252
            I+G S  M  ++  I    PS+  ILI GE+G GKEL+A+ +H  SNR  QPLV VNCA
Sbjct: 141 PIVGASQAMCRVRDFIRQAGPSEATILIMGESGTGKELIAQGLHDASNRADQPLVKVNCA 200

Query: 253 AIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQN 312
           A+P +LLESELFG++KGAFTGA R + G+F LA GGTLFLDEIGELPL  QSK+LRALQ 
Sbjct: 201 ALPGHLLESELFGYMKGAFTGAVRDKPGRFQLARGGTLFLDEIGELPLELQSKLLRALQE 260

Query: 313 HEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDL 372
             ++P+G  R   VDVRI+AATNRDLK+ VEAG FR DL+ RL+V  +  PPLR+R  DL
Sbjct: 261 RVVEPLGAVRPVPVDVRIIAATNRDLKRAVEAGEFREDLFFRLNVLEVISPPLRDRLEDL 320

Query: 373 SLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQRG 431
            +LAG  +E+  RK       +  + L  L++Y WPGNVRELE+V+ RA + +++   G
Sbjct: 321 PMLAGRLLERLCRKNKKGIRSVSPEFLDALMRYSWPGNVRELENVLERALILSRSDTLG 379