Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., sigma-54 dependent DNA-binding response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  241 bits (615), Expect = 4e-68
 Identities = 138/325 (42%), Positives = 193/325 (59%), Gaps = 13/325 (4%)

Query: 193 EIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCA 252
           ++IG S  M  +K  I  +A + +++LI GE+G GKELVA  +H+  +R+ +PLV VNC 
Sbjct: 148 QMIGESPVMQRLKETIAAIAATDYSVLIRGESGTGKELVADMLHRLGSRRERPLVKVNCP 207

Query: 253 AIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQN 312
           +IP+ LLESELFGHVKGAFTGADR R G F  A  GTL LDEIG++  + Q+K+LR LQ 
Sbjct: 208 SIPDQLLESELFGHVKGAFTGADRTRRGLFMSAQRGTLLLDEIGDIGEALQTKLLRVLQE 267

Query: 313 HEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDL 372
            EI+PVG      VDVRI+A+TNR L++ ++ G FR DL++RL+V  I+ PPLRER+ D+
Sbjct: 268 REIRPVGSSASTLVDVRIIASTNRALEERIKQGLFREDLFYRLNVLTIHTPPLRERRDDI 327

Query: 373 SLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQRGR 432
            LLA +FV    R+L     ++    L+ L    WPGNVREL++ I R  +         
Sbjct: 328 PLLADHFVAATCRELSSPVKRISPGALACLAGREWPGNVRELQNYIRRLVVFC------- 380

Query: 433 PVTTLKVEDLGELQGPRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQRHLISETLTQAD 492
           P  T+    L  + G       PT  + P L  +    G     ++F R  +   L Q  
Sbjct: 381 PGDTIDTAHLRLVDGTTC----PTTAETPSLVPYKEAKGA--VVEDFTRRYVEGLLRQTG 434

Query: 493 FNWAEAARRLQTDRANLTRLAKRLG 517
            N +EAAR    +R +L ++ +RLG
Sbjct: 435 GNISEAARLSGIERVSLQKILRRLG 459