Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  240 bits (613), Expect = 7e-68
 Identities = 155/388 (39%), Positives = 211/388 (54%), Gaps = 15/388 (3%)

Query: 134 SLKPDAFDHLS-PRSLEILAAIAAATLKMTLTFSELENQAKQTQLRLEELNQEAWSRDSV 192
           ++K  A D +  P SLE +   A   L+M       ENQA ++ L             + 
Sbjct: 92  AIKKGAHDFIEKPLSLEKVVIAAERALEMREL--RRENQALRSSLGA--------GSKAD 141

Query: 193 EIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCA 252
           E+IG S PM  ++  I  VAP+   +LI GE G GKEL AR +H  S R  +PLV VNCA
Sbjct: 142 ELIGESAPMRRIREQIARVAPTDAWVLITGENGTGKELAARAVHAGSQRATRPLVAVNCA 201

Query: 253 AIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQN 312
           AIPE L+ESELFGH KGAFTGA+ AR GKF +A  GTLFLDEIG++ L  Q+KILR LQ 
Sbjct: 202 AIPEELIESELFGHEKGAFTGAESARTGKFEMAHRGTLFLDEIGDMSLKTQAKILRILQE 261

Query: 313 HEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDL 372
              + VG  R   VDVR++AATN++L++++  G FR DLY+RL V+P+ +P LRER  D+
Sbjct: 262 QSFEKVGGTRTIRVDVRVVAATNKNLEEQIAQGTFREDLYYRLRVFPLSLPALRERGDDI 321

Query: 373 SLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQRGR 432
             L   F+ +  R      L    D    L++Y WPGNVREL + + R  +         
Sbjct: 322 LRLLDAFMLRLCRDHAFAPLTFTDDAQDVLLRYRWPGNVRELRNFVERMLILHAG--ESV 379

Query: 433 PVTTLKVEDLGELQGPRAAMVEPTAQD-EPMLGEWI-GELGLRDATDEFQRHLISETLTQ 490
            V  L  E L +L     +     AQ      G  + G L  + A + F+   ++E L +
Sbjct: 380 DVEDLPPECLRDLSPSSDSATGTAAQSATATCGTGVDGILDFKAARNAFETRFLAEQLQE 439

Query: 491 ADFNWAEAARRLQTDRANLTRLAKRLGI 518
              N +  A R+  +R++L R  K  GI
Sbjct: 440 CGGNVSRLAERIGLERSHLHRKLKGYGI 467