Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  251 bits (640), Expect = 4e-71
 Identities = 148/341 (43%), Positives = 204/341 (59%), Gaps = 15/341 (4%)

Query: 190 DSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYV 249
           D+  IIG S  +  +   +  VAP+   +L+ GE+G GKEL+ R +H  S R +QP V +
Sbjct: 4   DTCGIIGQSTTLCQVFRMLGKVAPTDSTVLVTGESGTGKELLVRALHANSQRAQQPFVPI 63

Query: 250 NCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRA 309
           NC AIP++LLESELFGH KGAFT A R+R G+F LADGGT+FLDEIGE+ L  Q KILR 
Sbjct: 64  NCGAIPKDLLESELFGHEKGAFTHAIRSRPGRFELADGGTIFLDEIGEMDLMLQVKILRV 123

Query: 310 LQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERK 369
           LQ  EI+ VG    + VDVRI+AATNRDL++EV AGRFR DLY+RL+V P+++PPLRER 
Sbjct: 124 LQEKEIERVGGTGTKKVDVRIVAATNRDLEREVAAGRFREDLYYRLNVIPLHLPPLRERG 183

Query: 370 GDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQ 429
           GD+ +LA +F+E+   +    +L L  D    L  Y WPGN+RELE+ + R ++ A+   
Sbjct: 184 GDILVLAEHFLERFCERKQRARLALAPDTRKVLAAYSWPGNIRELENFMERVSILAEGDI 243

Query: 430 RGRPVTTLK-VEDLGELQG-PRAAMVEPTAQ------------DEPMLGEWIGE-LGLRD 474
                   K ++++G++   P  A V P A             D P + +     +GL+D
Sbjct: 244 VDPADLPRKLLDEVGDIVTLPEPAPVAPAAHAADVCRPAGGGFDWPTIADMRQRGMGLKD 303

Query: 475 ATDEFQRHLISETLTQADFNWAEAARRLQTDRANLTRLAKR 515
             D  +  L+ E L  A+    +AA  L   R  L    K+
Sbjct: 304 FLDTMEDRLLQEALAMAEGVKNQAAEILGIKRTTLIEKLKK 344