Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  255 bits (652), Expect = 2e-72
 Identities = 143/334 (42%), Positives = 207/334 (61%), Gaps = 15/334 (4%)

Query: 190 DSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYV 249
           +S E++G S  M +++  +  VAPS + +LI GE+G GKE+VAR +H+ S R  +P + +
Sbjct: 143 ESGELVGESPAMQSVRRTVATVAPSDYTVLIRGESGTGKEMVARMVHRLSPRVDEPFLAL 202

Query: 250 NCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRA 309
           NC AIPE+LLESELFGHV+GAFTGA+R R G F++ADGGT+ LDEIG++  + Q+K+LR 
Sbjct: 203 NCPAIPEHLLESELFGHVRGAFTGAERDRKGLFSIADGGTVLLDEIGDISSNIQTKLLRF 262

Query: 310 LQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERK 369
           LQ  E++PVG  R + VDVRI+A+TN+DL+  + +  FR DL++RL+V  I+VPPLRER 
Sbjct: 263 LQEGEVRPVGSPRNEHVDVRIIASTNQDLEARMASRDFREDLFYRLNVVTIWVPPLRERL 322

Query: 370 GDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQ 429
            D+ LLA  F+ +A R+LG+ Q      VL  L++  WPGNVREL++ + R AL   +R 
Sbjct: 323 SDIPLLAATFLARASRELGVPQRDFDEGVLDHLMRREWPGNVRELQNYVRRLAL--FSRG 380

Query: 430 RGRPVTTLKVEDLGELQGPRAAMV-EPTAQDEPMLGEWIGELGLRDA----TDEFQRHLI 484
            G  +  ++  +  E   P A  V  P A+ E M          +DA     + F    +
Sbjct: 381 DGITLDAVQQAEQSESGAPAALCVPSPVAEGEVM--------PYKDAKASLVESFSERYL 432

Query: 485 SETLTQADFNWAEAARRLQTDRANLTRLAKRLGI 518
            + L     N  EAAR     R ++ ++  R GI
Sbjct: 433 RDLLESTGGNVTEAARLSGLSRVSIQKMVARYGI 466