Pairwise Alignments

Query, 402 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., nucleoside transporter (RefSeq) from Shewanella loihica PV-4

 Score =  436 bits (1122), Expect = e-127
 Identities = 222/419 (52%), Positives = 315/419 (75%), Gaps = 17/419 (4%)

Query: 1   MAILFGIIGVTVLILCAYLLSESRSAINWKTISRALLLQIGFAALVLYFPLGQTALSSLS 60
           M IL  ++GV VL+   +LLS ++ AIN +T+  AL +Q  FA  VLY P+G+  L S+S
Sbjct: 1   MDILMSLVGVVVLLAIGFLLSNNKKAINMRTVFGALAIQAFFAGFVLYVPIGKDILKSVS 60

Query: 61  NGVSGLLGFADVGIRFLFGDLAD--TGFIFAVRVLPIIIFFSALISALYYLGVMQKVIAL 118
           +GVS ++G+A  GI FLFGDLA+   GFIFA+ VLP+I+FFS+LI+ LYYLG+MQ +I +
Sbjct: 61  DGVSSVIGYAQNGIGFLFGDLANFKVGFIFAINVLPVIVFFSSLIAVLYYLGIMQWIIRI 120

Query: 119 IGGGIQRFLGTSKAESLVATGNIFLSQGESPLLVRPFLANMTRSELFAVMAGGMASVAGS 178
           IGGG+Q+ LGTS+ ES+ AT NIF+ Q E+PL+VRPF+A MT+SELFA+M GG+AS+AGS
Sbjct: 121 IGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIATMTQSELFAIMVGGLASIAGS 180

Query: 179 VLGGYAGLGVELKYLIAASFMAAPGSLMMAKIIVPERGVPIDQ-SQVELDKAQDSNLIDA 237
           VL GYA +GV ++YL+AASFMAAPG L+MAK++ PE    +++  ++  D  + +N++DA
Sbjct: 181 VLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEKTVNEMDELPEDPDKPANVLDA 240

Query: 238 LASGAMNGMKVAVAVGTMLIAFVSVIAMVNTGLENLGDLVGFSGITLQAMFGYLFAPLAW 297
            A+GA +GM +A+ VG ML+AFV +IAM+N  +  +  L G  GITL+ + GY+F PLA+
Sbjct: 241 AAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVTGLFGAEGITLELILGYIFMPLAF 300

Query: 298 VIGIPSHEVLAAGSYIGQKVVMNEFVAFIDFVEH--------------KALLSEHSQVII 343
           +IG+P +E L AGS+IGQK+V+NEFVA+++F  +               A++++ ++ II
Sbjct: 301 LIGVPWNEALIAGSFIGQKIVVNEFVAYLNFAPYLKDVADGGLLVEATNAVMTDRTKAII 360

Query: 344 TFALCGFANIGSIAIQLGSIGVIAPERRSEVANLGIKAVIAGTLANLMSACLAGIFISL 402
           +FALCGFAN+ SIAI LG +G +AP RR ++A LGI+AVIAG+LANLMSA LAG+F++L
Sbjct: 361 SFALCGFANLSSIAILLGGLGAMAPTRRHDLAKLGIRAVIAGSLANLMSATLAGLFLAL 419