Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  228 bits (580), Expect = 7e-64
 Identities = 124/355 (34%), Positives = 217/355 (61%), Gaps = 4/355 (1%)

Query: 292 RMMLTTLAVAAIF--IFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIA 349
           RM+++   V A    + + + L  SI  P+ +      ++ RGD  L++ IE  GNDE++
Sbjct: 189 RMVVSLFVVFAALATVALAMLLTRSIVKPLGEALNAAENVARGD--LTRPIETHGNDEVS 246

Query: 350 QLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAIN 409
           +L K      + + ++++ ++ ++ +L  AA+ ++   L +  + QQQ ++  Q  TA+ 
Sbjct: 247 RLLKALAAMQQNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQAATAVT 306

Query: 410 QMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLAS 469
           +M   + E+A NA + ++   Q+S +A  G+  V+   +AI  LA D++ TG +V+ LA+
Sbjct: 307 EMTTAVEEVARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALASDVQVTGGLVQSLAN 366

Query: 470 TTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEE 529
            +Q+IG +LD IR I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT  ST+E
Sbjct: 367 QSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAYRTQQSTQE 426

Query: 530 IQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATA 589
           I++M+  +++ A  A+ +M A  +     +A ++ A   L +I+  +++I +RN  +A+A
Sbjct: 427 IEQMVQGMRSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNEIHERNLVIASA 486

Query: 590 TEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
            EEQ+ V   +++N+  I  ++  + S A++ + +S  L +L+  L  +V  F++
Sbjct: 487 AEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQLANSLRTMVQRFQV 541