Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (607), Expect = 5e-67
 Identities = 139/367 (37%), Positives = 212/367 (57%), Gaps = 4/367 (1%)

Query: 282 VFAELDAVAQRMMLTTLAVAAIFIFM----GIFLANSIAMPINQIAKRFTDLGRGDGDLS 337
           V A++    Q ++L+ + +AA+ + +    G+ LAN+I  P++ +     D+  G+GDL+
Sbjct: 193 VEAKVHDRVQGVILSIVGIAAVVLLVIAVVGLLLANAILRPLHLMKDNLDDIAAGEGDLT 252

Query: 338 QRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQ 397
           +R+ +   DE+ QL+  FN F++KIH  ++ +   + +L      VS +A  +    ++Q
Sbjct: 253 RRLTITSQDELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQ 312

Query: 398 RDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDI 457
           R +T QV TAIN+M +   E+A +A  AA  A Q        + VV  + + I  L +DI
Sbjct: 313 RHETDQVATAINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDI 372

Query: 458 ENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVR 517
            ++G  ++ L      I S+L  IR I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR
Sbjct: 373 RSSGVSLDSLQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 432

Query: 518 NLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIH 577
            LASRT  ST+EIQ MI++LQ+    AV AM             ++EA   L +++  I 
Sbjct: 433 ALASRTQQSTQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIG 492

Query: 578 DISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDK 637
            I+  N Q+A+A EEQ+ V   IN+++ +I    +      +  A  S+SL +L  RL K
Sbjct: 493 TINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGK 552

Query: 638 LVGNFKL 644
           LVG F++
Sbjct: 553 LVGQFRI 559