Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  272 bits (696), Expect = 3e-77
 Identities = 192/636 (30%), Positives = 321/636 (50%), Gaps = 25/636 (3%)

Query: 18  KVVLGVTLAVLASTLIVGVM----AQRQAREVLEHRLVDLELPNILKLIKSDIDHEVLQL 73
           K++LG  + V+A  L   +      Q   RE L HR +      +   + S +   +L +
Sbjct: 10  KILLGACVIVMAVFLSFSLFNDHRQQASTREAL-HRNLQATGQLLGANLDSWLAGRILLI 68

Query: 74  LASAQQIASNEFVQQAIATTERDPATEALLVKQLNNLRDQYRLNDASVANRKTAYYWNQN 133
             +A+ IA++   Q   A   +D  T+  +   +     ++ ++   V           +
Sbjct: 69  EGAAETIAADPTPQTIGAILSQDIITKTFIASYVGLEDSRFFIHPERVM---------PD 119

Query: 134 GFLRELNQQQDGWFFGFIGSGKPTMVSMFQEANGEVKMFANYQ--LVNGNTMS--GMSKS 189
           G+    + +Q  W+     S +P +   +  A  +  +        V+G  +   G S S
Sbjct: 120 GY----DVRQRAWYKDAARSLEPVLTEPYIGAGIDYLIMTQAAPIKVDGKAVGVLGASLS 175

Query: 190 MDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNKSGFNL 249
           ++ + +++N+  +   G+ FL +  G++ +H    +V  +L Q +  G  ++   S  N 
Sbjct: 176 LEQLAKIINAVDLNGIGYAFLVSDDGKILVHPDNTRVTKTLAQAFPEGPPSI--NSALNE 233

Query: 250 ISTDYQGEEVMVASIY-IESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMG 308
           +  + +   V    I  + S+ W +  +V   + +A L A     ++ TL    + + + 
Sbjct: 234 VQENGRTRIVTFTPINGLPSLHWSIGLSVDKDKAYAVLHAFRASALVATLIAMLVTVGLL 293

Query: 309 IFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKD 368
             L N++  P+  +      +  G+GDL+QR+     DE   ++ GFN F+E+I QSI++
Sbjct: 294 GLLINALMRPLRSMGSAMQSIADGEGDLTQRLHSLSRDEFGMMAGGFNRFVERIQQSIRE 353

Query: 369 VAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAET 428
           V  +S +L   A  VS+ +  +  +S  Q   T  V TAIN++GA   EIA +AA A+  
Sbjct: 354 VLASSVQLTQLAAQVSQASNASLKSSDTQAALTHNVATAINELGAAAQEIARSAAHASSR 413

Query: 429 ANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQT 488
           A+       +G++VV ++  A+S+L+  + NT + +E L   T +IG ILD I+GIS+QT
Sbjct: 414 ASDTRDQTQEGQSVVQRSISAMSQLSSQVVNTRQDIESLNEKTLKIGRILDVIKGISDQT 473

Query: 489 NLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAM 548
           NLLALNAAIEAARAGD GRGFAVV+DEVR LA RT  S +EI  MI +LQ  A +AVSAM
Sbjct: 474 NLLALNAAIEAARAGDAGRGFAVVSDEVRTLAHRTQQSAQEIHSMIEELQAGAGSAVSAM 533

Query: 549 DAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEIN 608
              +  +   V  +  A + L  +   I +I + N  VATATEEQ++VV  ++++I  IN
Sbjct: 534 LESQRHSDDNVTTARLAGERLNRVLMGIGEIDEINLSVATATEEQTSVVDNLDRDISHIN 593

Query: 609 AINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
            +N+      +    A   L   S RL ++V  FK+
Sbjct: 594 DLNQEMVGNLQSTLQACTELENQSRRLQQMVNTFKI 629